Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB0R81_RS07325 Genome accession   NZ_CP160215
Coordinates   1401092..1401688 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain JJ213     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1396092..1406688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R81_RS07295 (AB0R81_07295) - 1396307..1396762 (+) 456 WP_199022503.1 flavodoxin -
  AB0R81_RS07300 (AB0R81_07300) dapD 1396843..1397553 (+) 711 WP_012117443.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AB0R81_RS07305 (AB0R81_07305) - 1397624..1398748 (+) 1125 WP_046702332.1 N-acetyldiaminopimelate deacetylase -
  AB0R81_RS07310 (AB0R81_07310) - 1398809..1399054 (+) 246 WP_003154596.1 YkuS family protein -
  AB0R81_RS07315 (AB0R81_07315) - 1399088..1399894 (-) 807 WP_038463800.1 mechanosensitive ion channel family protein -
  AB0R81_RS07320 (AB0R81_07320) - 1400181..1400639 (+) 459 WP_095353001.1 TlpA disulfide reductase family protein -
  AB0R81_RS07325 (AB0R81_07325) rok 1401092..1401688 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  AB0R81_RS07330 (AB0R81_07330) - 1401709..1402701 (-) 993 WP_043021218.1 hypothetical protein -
  AB0R81_RS07335 (AB0R81_07335) - 1402847..1403449 (+) 603 WP_025284661.1 molybdenum cofactor guanylyltransferase -
  AB0R81_RS07340 (AB0R81_07340) - 1403501..1404520 (+) 1020 WP_069007529.1 molybdopterin-synthase adenylyltransferase MoeB -
  AB0R81_RS07345 (AB0R81_07345) glp 1404538..1405830 (+) 1293 WP_069007530.1 gephyrin-like molybdotransferase Glp -
  AB0R81_RS07350 (AB0R81_07350) mobB 1405791..1406312 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=1019306 AB0R81_RS07325 WP_012117447.1 1401092..1401688(+) (rok) [Bacillus velezensis strain JJ213]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1019306 AB0R81_RS07325 WP_012117447.1 1401092..1401688(+) (rok) [Bacillus velezensis strain JJ213]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment