Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   AB0R81_RS01790 Genome accession   NZ_CP160215
Coordinates   333431..333829 (-) Length   132 a.a.
NCBI ID   WP_014416873.1    Uniprot ID   I2C179
Organism   Bacillus velezensis strain JJ213     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 328431..338829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R81_RS01765 (AB0R81_01765) - 328603..329805 (+) 1203 WP_012116765.1 GTP-binding protein -
  AB0R81_RS01770 (AB0R81_01770) - 329870..331006 (+) 1137 WP_025284207.1 zinc-dependent alcohol dehydrogenase -
  AB0R81_RS01775 (AB0R81_01775) - 331021..331455 (+) 435 WP_012116767.1 RDD family protein -
  AB0R81_RS01780 (AB0R81_01780) - 331527..331850 (+) 324 WP_007409357.1 YckD family protein -
  AB0R81_RS01785 (AB0R81_01785) - 331954..333390 (+) 1437 WP_025284208.1 family 1 glycosylhydrolase -
  AB0R81_RS01790 (AB0R81_01790) nin/comJ 333431..333829 (-) 399 WP_014416873.1 competence protein ComJ Regulator
  AB0R81_RS01795 (AB0R81_01795) nucA/comI 333850..334287 (-) 438 WP_069007410.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AB0R81_RS01800 (AB0R81_01800) hxlB 334644..335201 (-) 558 WP_007409354.1 6-phospho-3-hexuloisomerase -
  AB0R81_RS01805 (AB0R81_01805) hxlA 335198..335833 (-) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  AB0R81_RS01810 (AB0R81_01810) - 336065..336427 (+) 363 WP_012116770.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14893.89 Da        Isoelectric Point: 4.7846

>NTDB_id=1019282 AB0R81_RS01790 WP_014416873.1 333431..333829(-) (nin/comJ) [Bacillus velezensis strain JJ213]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1019282 AB0R81_RS01790 WP_014416873.1 333431..333829(-) (nin/comJ) [Bacillus velezensis strain JJ213]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTTCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C179

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765

Multiple sequence alignment