Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AB0R66_RS04345 Genome accession   NZ_CP160214
Coordinates   893636..894427 (+) Length   263 a.a.
NCBI ID   WP_003155502.1    Uniprot ID   A0A9Q3QM78
Organism   Bacillus velezensis strain JJ747     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 888636..899427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R66_RS04320 (AB0R66_04320) - 890631..891515 (+) 885 WP_327941943.1 PhzF family phenazine biosynthesis isomerase -
  AB0R66_RS04325 (AB0R66_04325) - 891592..892176 (+) 585 WP_007408549.1 nitroreductase -
  AB0R66_RS04330 (AB0R66_04330) - 892215..892406 (-) 192 WP_003155508.1 YfhD family protein -
  AB0R66_RS04335 (AB0R66_04335) - 892477..892587 (-) 111 WP_003155504.1 YfhE family protein -
  AB0R66_RS04340 (AB0R66_04340) - 892645..893544 (-) 900 WP_327941942.1 TIGR01777 family oxidoreductase -
  AB0R66_RS04345 (AB0R66_04345) recX 893636..894427 (+) 792 WP_003155502.1 recombination regulator RecX Regulator
  AB0R66_RS04350 (AB0R66_04350) - 894434..894748 (+) 315 WP_007408553.1 YfhH family protein -
  AB0R66_RS04355 (AB0R66_04355) - 894893..896086 (+) 1194 WP_076982912.1 MFS transporter -
  AB0R66_RS04360 (AB0R66_04360) - 896126..896515 (-) 390 WP_020955526.1 DUF2606 family protein -
  AB0R66_RS04365 (AB0R66_04365) - 896478..897381 (-) 904 Protein_813 serine protease -
  AB0R66_RS04370 (AB0R66_04370) - 897527..897679 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  AB0R66_RS04375 (AB0R66_04375) - 897803..898072 (+) 270 WP_003155492.1 YfhJ family protein -
  AB0R66_RS04380 (AB0R66_04380) - 898200..898727 (+) 528 WP_062623300.1 SH3 domain-containing protein -
  AB0R66_RS04385 (AB0R66_04385) - 898813..899148 (+) 336 WP_007408558.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30978.18 Da        Isoelectric Point: 6.2735

>NTDB_id=1019214 AB0R66_RS04345 WP_003155502.1 893636..894427(+) (recX) [Bacillus velezensis strain JJ747]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1019214 AB0R66_RS04345 WP_003155502.1 893636..894427(+) (recX) [Bacillus velezensis strain JJ747]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAAATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAGGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAGGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGTTATGAAAGCGGAATGAAG
GTTAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.087

100

0.791

Multiple sequence alignment