Detailed information NTG1019210

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB0R66_RS02025
• Genome accession: NZ_CP160214
• Coordinates: 432285..433433 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JJ747
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 427285..438433

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R66_RS02005 (AB0R66_02005)	-	427685..428368 (-)	684	WP_094032071.1	ABC transporter ATP-binding protein	-
AB0R66_RS02010 (AB0R66_02010)	-	428383..429819 (-)	1437	WP_094032072.1	ABC transporter permease	-
AB0R66_RS02015 (AB0R66_02015)	-	430032..430715 (+)	684	WP_007410267.1	response regulator transcription factor	-
AB0R66_RS02020 (AB0R66_02020)	-	430702..432123 (+)	1422	WP_195182934.1	HAMP domain-containing sensor histidine kinase	-
AB0R66_RS02025 (AB0R66_02025)	rapC	432285..433433 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
AB0R66_RS02030 (AB0R66_02030)	phrC	433417..433536 (+)	120	WP_064115825.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AB0R66_RS02035 (AB0R66_02035)	-	433685..433780 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
AB0R66_RS02040 (AB0R66_02040)	-	433875..435239 (-)	1365	WP_241457887.1	aspartate kinase	-
AB0R66_RS02045 (AB0R66_02045)	ceuB	435653..436606 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
AB0R66_RS02050 (AB0R66_02050)	-	436596..437543 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
AB0R66_RS02055 (AB0R66_02055)	-	437537..438295 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1019210 AB0R66_RS02025 WP_007410270.1 432285..433433(+) (rapC) [Bacillus velezensis strain JJ747]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1019210 AB0R66_RS02025 WP_007410270.1 432285..433433(+) (rapC) [Bacillus velezensis strain JJ747]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568