Detailed information NTG1019199

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQM50_RS05395
• Genome accession: NZ_LS483347
• Coordinates: 1000916..1001986 (+)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain NCTC8324
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 995916..1006986

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM50_RS05375 (NCTC8324_01088)	-	996910..997608 (+)	699	WP_002989743.1	GntR family transcriptional regulator	-
DQM50_RS05380 (NCTC8324_01089)	-	997706..998038 (+)	333	WP_002989745.1	putative DNA-binding protein	-
DQM50_RS05385 (NCTC8324_01090)	ffh	998053..999615 (+)	1563	WP_085613835.1	signal recognition particle protein	-
DQM50_RS05390 (NCTC8324_01091)	-	999750..1000448 (-)	699	WP_002993300.1	XRE family transcriptional regulator	-
DQM50_RS05395 (NCTC8324_01092)	xerS	1000916..1001986 (+)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
DQM50_RS05400 (NCTC8324_01093)	-	1002687..1003169 (+)	483	WP_002984600.1	PASTA domain-containing protein	-
DQM50_RS05405 (NCTC8324_01094)	citC	1003258..1004310 (+)	1053	WP_085613836.1	[citrate (pro-3S)-lyase] ligase	-
DQM50_RS05410 (NCTC8324_01095)	-	1004421..1005815 (-)	1395	WP_168393010.1	oxaloacetate decarboxylase subunit alpha	-
DQM50_RS05415 (NCTC8324_01096)	citX	1005830..1006408 (-)	579	WP_010922331.1	citrate lyase holo-[acyl-carrier protein] synthase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=1019199 DQM50_RS05395 WP_002984598.1 1000916..1001986(+) (xerS) [Streptococcus pyogenes strain NCTC8324]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=1019199 DQM50_RS05395 WP_002984598.1 1000916..1001986(+) (xerS) [Streptococcus pyogenes strain NCTC8324]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCCTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806