Detailed information NTG1019135

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB0R80_RS02045
• Genome accession: NZ_CP160213
• Coordinates: 440249..441397 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JM199
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 435249..446397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R80_RS02025 (AB0R80_02025)	-	435647..436330 (-)	684	WP_327935240.1	ABC transporter ATP-binding protein	-
AB0R80_RS02030 (AB0R80_02030)	-	436345..437781 (-)	1437	WP_327935239.1	ABC transporter permease	-
AB0R80_RS02035 (AB0R80_02035)	-	437993..438676 (+)	684	WP_007410267.1	response regulator transcription factor	-
AB0R80_RS02040 (AB0R80_02040)	-	438663..440096 (+)	1434	WP_015416810.1	HAMP domain-containing sensor histidine kinase	-
AB0R80_RS02045 (AB0R80_02045)	rapC	440249..441397 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
AB0R80_RS02050 (AB0R80_02050)	phrC	441381..441500 (+)	120	WP_031378677.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AB0R80_RS02055 (AB0R80_02055)	-	441649..441744 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
AB0R80_RS02060 (AB0R80_02060)	-	441839..443203 (-)	1365	WP_033575080.1	aspartate kinase	-
AB0R80_RS02065 (AB0R80_02065)	ceuB	443617..444570 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
AB0R80_RS02070 (AB0R80_02070)	-	444560..445507 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
AB0R80_RS02075 (AB0R80_02075)	-	445501..446259 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1019135 AB0R80_RS02045 WP_007410270.1 440249..441397(+) (rapC) [Bacillus velezensis strain JM199]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1019135 AB0R80_RS02045 WP_007410270.1 440249..441397(+) (rapC) [Bacillus velezensis strain JM199]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGATTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568