Detailed information NTG1019059

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB0R70_RS02040
• Genome accession: NZ_CP160212
• Coordinates: 405156..406304 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JM204
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 400156..411304

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R70_RS02020 (AB0R70_02020)	-	400577..401260 (-)	684	WP_114354851.1	ABC transporter ATP-binding protein	-
AB0R70_RS02025 (AB0R70_02025)	-	401275..402687 (-)	1413	WP_114354852.1	ABC transporter permease	-
AB0R70_RS02030 (AB0R70_02030)	-	402900..403583 (+)	684	WP_007410267.1	response regulator transcription factor	-
AB0R70_RS02035 (AB0R70_02035)	-	403570..405003 (+)	1434	WP_165913860.1	HAMP domain-containing sensor histidine kinase	-
AB0R70_RS02040 (AB0R70_02040)	rapC	405156..406304 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
AB0R70_RS02045 (AB0R70_02045)	phrC	406288..406407 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AB0R70_RS02050 (AB0R70_02050)	-	406556..406651 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
AB0R70_RS02055 (AB0R70_02055)	-	406746..408110 (-)	1365	WP_169510070.1	aspartate kinase	-
AB0R70_RS02060 (AB0R70_02060)	ceuB	408524..409477 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
AB0R70_RS02065 (AB0R70_02065)	-	409467..410414 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
AB0R70_RS02070 (AB0R70_02070)	-	410408..411166 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1019059 AB0R70_RS02040 WP_007410270.1 405156..406304(+) (rapC) [Bacillus velezensis strain JM204]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1019059 AB0R70_RS02040 WP_007410270.1 405156..406304(+) (rapC) [Bacillus velezensis strain JM204]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGATTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568