Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB0R79_RS07310 Genome accession   NZ_CP160211
Coordinates   1403136..1403732 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain JM236     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1398136..1408732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R79_RS07280 (AB0R79_07280) - 1398349..1398804 (+) 456 WP_015239762.1 flavodoxin -
  AB0R79_RS07285 (AB0R79_07285) dapD 1398886..1399596 (+) 711 WP_015239763.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AB0R79_RS07290 (AB0R79_07290) - 1399667..1400791 (+) 1125 WP_012117444.1 N-acetyldiaminopimelate deacetylase -
  AB0R79_RS07295 (AB0R79_07295) - 1400852..1401097 (+) 246 WP_003154596.1 YkuS family protein -
  AB0R79_RS07300 (AB0R79_07300) - 1401131..1401937 (-) 807 WP_015239764.1 mechanosensitive ion channel family protein -
  AB0R79_RS07305 (AB0R79_07305) - 1402225..1402683 (+) 459 WP_167340637.1 TlpA disulfide reductase family protein -
  AB0R79_RS07310 (AB0R79_07310) rok 1403136..1403732 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  AB0R79_RS07315 (AB0R79_07315) - 1403753..1404745 (-) 993 WP_012117448.1 hypothetical protein -
  AB0R79_RS07320 (AB0R79_07320) - 1404891..1405493 (+) 603 WP_076424045.1 molybdenum cofactor guanylyltransferase -
  AB0R79_RS07325 (AB0R79_07325) - 1405545..1406564 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  AB0R79_RS07330 (AB0R79_07330) glp 1406582..1407874 (+) 1293 WP_059367088.1 gephyrin-like molybdotransferase Glp -
  AB0R79_RS07335 (AB0R79_07335) mobB 1407835..1408356 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=1019004 AB0R79_RS07310 WP_012117447.1 1403136..1403732(+) (rok) [Bacillus velezensis strain JM236]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1019004 AB0R79_RS07310 WP_012117447.1 1403136..1403732(+) (rok) [Bacillus velezensis strain JM236]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment