Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB0R71_RS07370 Genome accession   NZ_CP160210
Coordinates   1406243..1406839 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain JM907     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1401243..1411839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R71_RS07340 (AB0R71_07350) - 1401456..1401911 (+) 456 WP_007409622.1 flavodoxin -
  AB0R71_RS07345 (AB0R71_07355) dapD 1401993..1402703 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AB0R71_RS07350 (AB0R71_07360) - 1402774..1403898 (+) 1125 WP_327975881.1 N-acetyldiaminopimelate deacetylase -
  AB0R71_RS07355 (AB0R71_07365) - 1403959..1404204 (+) 246 WP_003154596.1 YkuS family protein -
  AB0R71_RS07360 (AB0R71_07370) - 1404238..1405044 (-) 807 WP_322823743.1 mechanosensitive ion channel family protein -
  AB0R71_RS07365 (AB0R71_07375) - 1405333..1405791 (+) 459 WP_322823744.1 TlpA disulfide reductase family protein -
  AB0R71_RS07370 (AB0R71_07380) rok 1406243..1406839 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  AB0R71_RS07375 (AB0R71_07385) - 1406860..1407852 (-) 993 WP_012117448.1 hypothetical protein -
  AB0R71_RS07380 (AB0R71_07390) - 1407998..1408600 (+) 603 WP_025284661.1 molybdenum cofactor guanylyltransferase -
  AB0R71_RS07385 (AB0R71_07395) - 1408652..1409671 (+) 1020 WP_052827375.1 molybdopterin-synthase adenylyltransferase MoeB -
  AB0R71_RS07390 (AB0R71_07400) glp 1409689..1410981 (+) 1293 WP_327975880.1 gephyrin-like molybdotransferase Glp -
  AB0R71_RS07395 (AB0R71_07405) mobB 1410942..1411463 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=1018928 AB0R71_RS07370 WP_012117447.1 1406243..1406839(+) (rok) [Bacillus velezensis strain JM907]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1018928 AB0R71_RS07370 WP_012117447.1 1406243..1406839(+) (rok) [Bacillus velezensis strain JM907]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment