Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AB0R71_RS07270 Genome accession   NZ_CP160210
Coordinates   1390377..1390841 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain JM907     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1385377..1395841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R71_RS07250 (AB0R71_07260) - 1385858..1387678 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  AB0R71_RS07255 (AB0R71_07265) - 1387659..1388872 (-) 1214 Protein_1370 aminotransferase A -
  AB0R71_RS07260 (AB0R71_07270) - 1389073..1389234 (-) 162 WP_007409608.1 hypothetical protein -
  AB0R71_RS07265 (AB0R71_07275) cheV 1389423..1390334 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  AB0R71_RS07270 (AB0R71_07280) kre 1390377..1390841 (-) 465 WP_003154622.1 YkyB family protein Regulator
  AB0R71_RS07275 (AB0R71_07285) - 1390964..1392256 (-) 1293 WP_015239757.1 MFS transporter -
  AB0R71_RS07280 (AB0R71_07290) - 1392332..1392826 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  AB0R71_RS07285 (AB0R71_07295) - 1392901..1393764 (-) 864 WP_327975882.1 metallophosphoesterase -
  AB0R71_RS07290 (AB0R71_07300) fadH 1393908..1394672 (+) 765 WP_015417368.1 2,4-dienoyl-CoA reductase -
  AB0R71_RS07295 (AB0R71_07305) - 1394837..1395333 (+) 497 Protein_1378 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1018927 AB0R71_RS07270 WP_003154622.1 1390377..1390841(-) (kre) [Bacillus velezensis strain JM907]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1018927 AB0R71_RS07270 WP_003154622.1 1390377..1390841(-) (kre) [Bacillus velezensis strain JM907]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGTAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment