Detailed information NTG1018685

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQL04_RS04490
• Genome accession: NZ_LS483340
• Coordinates: 869107..870177 (+)
• Length: 356 a.a.
• NCBI ID: WP_027968836.1
• Uniprot ID: Q5XC26
• Organism: Streptococcus pyogenes strain NCTC12062
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 864107..875177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL04_RS04470 (NCTC12062_00887)	-	865099..865797 (+)	699	WP_002989743.1	GntR family transcriptional regulator	-
DQL04_RS04475 (NCTC12062_00888)	-	865895..866227 (+)	333	WP_002989745.1	putative DNA-binding protein	-
DQL04_RS04480 (NCTC12062_00889)	ffh	866242..867804 (+)	1563	WP_002993302.1	signal recognition particle protein	-
DQL04_RS04485 (NCTC12062_00890)	-	867939..868637 (-)	699	WP_014635476.1	XRE family transcriptional regulator	-
DQL04_RS04490 (NCTC12062_00891)	xerS	869107..870177 (+)	1071	WP_027968836.1	tyrosine recombinase XerS	Machinery gene
DQL04_RS04495 (NCTC12062_00892)	-	870877..871359 (+)	483	WP_047235803.1	PASTA domain-containing protein	-
DQL04_RS04500 (NCTC12062_00893)	citC	871448..872500 (+)	1053	WP_047235804.1	[citrate (pro-3S)-lyase] ligase	-
DQL04_RS04505 (NCTC12062_00894)	-	872610..874004 (-)	1395	WP_047235805.1	oxaloacetate decarboxylase subunit alpha	-
DQL04_RS04510 (NCTC12062_00895)	citX	874019..874597 (-)	579	WP_010922331.1	citrate lyase holo-[acyl-carrier protein] synthase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41487.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=1018685 DQL04_RS04490 WP_027968836.1 869107..870177(+) (xerS) [Streptococcus pyogenes strain NCTC12062]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIISLLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=1018685 DQL04_RS04490 WP_027968836.1 869107..870177(+) (xerS) [Streptococcus pyogenes strain NCTC12062]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTATAAGGCCATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAGTTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGTCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTATAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGAGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTTCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (177-344)

3D structure

• AlphaFold DB: Q5XC26

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.337	100	0.803