Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DQL34_RS06415 Genome accession   NZ_LS483339
Coordinates   1190535..1191017 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain NCTC12958     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1185535..1196017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL34_RS06395 (NCTC12958_01331) pepT 1186017..1187240 (-) 1224 WP_084830662.1 peptidase T -
  DQL34_RS06400 (NCTC12958_01332) lepB 1187447..1188004 (-) 558 WP_100262463.1 signal peptidase I -
  DQL34_RS06405 (NCTC12958_01333) - 1188127..1189356 (-) 1230 WP_111679619.1 tetratricopeptide repeat protein -
  DQL34_RS06410 (NCTC12958_01334) - 1189346..1190524 (-) 1179 WP_023909688.1 AI-2E family transporter -
  DQL34_RS06415 (NCTC12958_01335) mutX 1190535..1191017 (-) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  DQL34_RS06420 (NCTC12958_01336) ftsX 1191173..1192102 (-) 930 WP_084828856.1 permease-like cell division protein FtsX -
  DQL34_RS06425 (NCTC12958_01337) ftsE 1192095..1192787 (-) 693 WP_084829221.1 cell division ATP-binding protein FtsE -
  DQL34_RS06435 (NCTC12958_01339) queG 1194026..1195144 (-) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=1018569 DQL34_RS06415 WP_011226072.1 1190535..1191017(-) (mutX) [Streptococcus thermophilus strain NCTC12958]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1018569 DQL34_RS06415 WP_011226072.1 1190535..1191017(-) (mutX) [Streptococcus thermophilus strain NCTC12958]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706