Detailed information NTG1018482

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: DQM35_RS05370
• Genome accession: NZ_LS483338
• Coordinates: 1029392..1031602 (-)
• Length: 736 a.a.
• NCBI ID: WP_020833432.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12064
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1024392..1036602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM35_RS05340 (NCTC12064_01056)	-	1024625..1025731 (-)	1107	WP_020833434.1	FAD-binding oxidoreductase	-
DQM35_RS05345 (NCTC12064_01057)	-	1025771..1026559 (-)	789	WP_002984887.1	Nif3-like dinuclear metal center hexameric protein	-
DQM35_RS05350 (NCTC12064_01058)	-	1026549..1027235 (-)	687	WP_002984888.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	-
DQM35_RS05355 (NCTC12064_01059)	nth	1027307..1027963 (-)	657	WP_014407519.1	endonuclease III	-
DQM35_RS05360 (NCTC12064_01060)	-	1027960..1028643 (-)	684	WP_002984890.1	DnaD domain-containing protein	-
DQM35_RS05365 (NCTC12064_01061)	-	1028724..1029242 (-)	519	WP_020833433.1	adenine phosphoribosyltransferase	-
DQM35_RS05370 (NCTC12064_01062)	recJ	1029392..1031602 (-)	2211	WP_020833432.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
DQM35_RS05375 (NCTC12064_01063)	-	1031599..1032363 (-)	765	WP_038431293.1	SDR family oxidoreductase	-
DQM35_RS05380 (NCTC12064_01064)	rnz	1032363..1033292 (-)	930	WP_009881223.1	ribonuclease Z	-
DQM35_RS05385 (NCTC12064_01065)	-	1033307..1033942 (-)	636	WP_002990114.1	cystathionine beta-lyase	-
DQM35_RS05390 (NCTC12064_01066)	hflX	1033935..1035173 (-)	1239	WP_038431290.1	GTPase HflX	-
DQM35_RS05395 (NCTC12064_01067)	miaA	1035246..1036145 (-)	900	WP_002984897.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
DQM35_RS05400 (NCTC12064_01068)	-	1036279..1036455 (+)	177	WP_002984898.1	DUF3042 family protein	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 82576.50 Da
• Isoelectric Point: 4.8503

>NTDB_id=1018482 DQM35_RS05370 WP_020833432.1 1029392..1031602(-) (recJ) [Streptococcus pyogenes strain NCTC12064]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQEARAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDFLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMNHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFKAWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ

Nucleotide

• Length: 2211 bp

>NTDB_id=1018482 DQM35_RS05370 WP_020833432.1 1029392..1031602(-) (recJ) [Streptococcus pyogenes strain NCTC12064]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGAGCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCTAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGACGGGCTTTGATGACCAAGAAGCTCGAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCCTTAGTCCAAGACATTTTTGACCAAGCGATGGCTATGGTTGATCCTCAAAAACCTGTTCAAGTCTT
GGCACAAGCTGGCTGGCATCCTGGTGTTCTTGGGATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTCGTCG
TTTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCCTTGAATGGC
AAGCGTGAGTTATTTACAGCCTTTGGGGGACATGCTGGTGCAGCAGGAATGACCCTGCCCGTTGACAACTTGGAAGCTCT
TTCAGACTTTCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCCAAAAATACGTTAACTATTGATGAAAGAC
TGTCTTTGGACGACCTTAGCCTTGATATTTTAAAGAGTTTAGATAAATTAGCCCCTTATGGGATGAATCATCAAAAGCCG
GTCTTTTATGTCAAGGACATAAGGGTTAGTCAAGCGCGTACCATAGGGCAAGACCAGAGCCATCTTAAATTTAAAGTCAG
TCAGGGCAAAGCTTCCTTTGACGTACTGGCTTTTGGTCAAGGAAGTCAACTGCAAGAGTTCCGACAAGCTACTGGTTTAG
AATTAGCAGTTACCTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAC
GGAGTGCAACTTCTTGACTTAAGGACAAAAACAGCCAAAGTTCCTGAAGGTATTCCGACTATTGAAGAAGACCCAAATGC
CAGAGTCATTCTGATTAATGACATCCCTGAAGATTTCAAAGCCTGGCGCAACCAGTTTGTTCACAAGGATTTTGACGCCA
TCTATTTTAAAAATCAGATGAAACATCCTTATTATTTAACAGGATTTGGCAGCAGAGAGCAGTTTGCCAAGCTCTACAAA
ACCATCTATCAGTTTCCTGAATTTGATTTACGGCATAAATTGACAGAGTTGAGTCACTATTTAAACATAGAAAAACTTTT
ACTGATTAAGTTGATTCAAATTTTTGAAGAGTTGTCTTTTGTGACGATTGACGATGGGCTGATGACGGTTAACCCCCAAG
CGCAAAAACGAGAGATTTCAGAGAGCCACATTTACCAAGACTTAAAAGAATTGGTGAAATTTCAAGAAATCATGGCTTTG
GCTAGCCCGAAAGAGATGTATGATTATTTGGTGAAATCAAACGATCAATAA

Domains

Predicted by InterProScan.

• DHHA1 domain (DHHA1) (317-435)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• RecJ OB domain (RecJ_OB) (450-556)

• DHH family (DHH) (83-228)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.008	100	0.632
recJ	Bacillus subtilis subsp. subtilis str. 168	34.866	100	0.371