Detailed information NTG1018477

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQM35_RS04630
• Genome accession: NZ_LS483338
• Coordinates: 876882..877952 (+)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain NCTC12064
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 871882..882952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM35_RS04610 (NCTC12064_00909)	-	872874..873572 (+)	699	WP_002989743.1	GntR family transcriptional regulator	-
DQM35_RS04615 (NCTC12064_00910)	-	873670..874002 (+)	333	WP_002989745.1	putative DNA-binding protein	-
DQM35_RS04620 (NCTC12064_00911)	ffh	874017..875579 (+)	1563	WP_002993302.1	signal recognition particle protein	-
DQM35_RS04625 (NCTC12064_00912)	-	875714..876412 (-)	699	WP_014635476.1	helix-turn-helix transcriptional regulator	-
DQM35_RS04630 (NCTC12064_00913)	xerS	876882..877952 (+)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
DQM35_RS04635 (NCTC12064_00914)	-	878651..879133 (+)	483	WP_002984600.1	PASTA domain-containing protein	-
DQM35_RS04640 (NCTC12064_00915)	citC	879222..880274 (+)	1053	WP_002991776.1	[citrate (pro-3S)-lyase] ligase	-
DQM35_RS04645 (NCTC12064_00916)	-	880384..881778 (-)	1395	WP_014635474.1	oxaloacetate decarboxylase subunit alpha	-
DQM35_RS04650 (NCTC12064_00917)	citX	881793..882371 (-)	579	WP_011054513.1	citrate lyase holo-[acyl-carrier protein] synthase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=1018477 DQM35_RS04630 WP_002984598.1 876882..877952(+) (xerS) [Streptococcus pyogenes strain NCTC12064]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=1018477 DQM35_RS04630 WP_002984598.1 876882..877952(+) (xerS) [Streptococcus pyogenes strain NCTC12064]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ACGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806