Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   DQL30_RS00255 Genome accession   NZ_LS483333
Coordinates   33564..34319 (+) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain NCTC12048     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 28564..39319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL30_RS09475 - 29572..29780 (-) 209 Protein_14 hypothetical protein -
  DQL30_RS09480 - 29936..30217 (-) 282 WP_074375313.1 transposase -
  DQL30_RS00245 (NCTC12048_00049) pcsB 30964..32163 (+) 1200 WP_053308131.1 peptidoglycan hydrolase PcsB -
  DQL30_RS00250 (NCTC12048_00050) - 32416..33378 (+) 963 WP_111713543.1 ribose-phosphate diphosphokinase -
  DQL30_RS00255 (NCTC12048_00051) recO 33564..34319 (+) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  DQL30_RS00260 (NCTC12048_00052) plsX 34422..35429 (+) 1008 WP_053308132.1 phosphate acyltransferase PlsX -
  DQL30_RS00265 (NCTC12048_00053) - 35422..35664 (+) 243 WP_014407187.1 phosphopantetheine-binding protein -
  DQL30_RS00270 (NCTC12048_00054) purC 35816..36520 (+) 705 WP_168389346.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=1017935 DQL30_RS00255 WP_002986719.1 33564..34319(+) (recO) [Streptococcus pyogenes strain NCTC12048]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=1017935 DQL30_RS00255 WP_002986719.1 33564..34319(+) (recO) [Streptococcus pyogenes strain NCTC12048]
ATGCAACTAACAGAATCACTAGGCATTGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGCACTGATTTA
CCGCTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602