Detailed information NTG1017782

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQL10_RS04645
• Genome accession: NZ_LS483331
• Coordinates: 906727..907797 (-)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain NCTC12057
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 901727..912797

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL10_RS04625 (NCTC12057_00913)	citX	902325..902903 (+)	579	WP_023612460.1	citrate lyase holo-[acyl-carrier protein] synthase	-
DQL10_RS04630 (NCTC12057_00914)	-	902918..904312 (+)	1395	WP_023612467.1	oxaloacetate decarboxylase subunit alpha	-
DQL10_RS04635 (NCTC12057_00915)	citC	904422..905474 (-)	1053	WP_020905210.1	[citrate (pro-3S)-lyase] ligase	-
DQL10_RS04640 (NCTC12057_00916)	-	905563..906045 (-)	483	WP_023612471.1	PASTA domain-containing protein	-
DQL10_RS04645 (NCTC12057_00917)	xerS	906727..907797 (-)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
DQL10_RS04650 (NCTC12057_00918)	-	908266..908964 (+)	699	WP_002993300.1	XRE family transcriptional regulator	-
DQL10_RS04655 (NCTC12057_00919)	ffh	909081..910643 (-)	1563	WP_050336214.1	signal recognition particle protein	-
DQL10_RS04660 (NCTC12057_00920)	-	910658..910990 (-)	333	WP_002989745.1	putative DNA-binding protein	-
DQL10_RS04665 (NCTC12057_00921)	-	911088..911786 (-)	699	WP_002993304.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=1017782 DQL10_RS04645 WP_002984598.1 906727..907797(-) (xerS) [Streptococcus pyogenes strain NCTC12057]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=1017782 DQL10_RS04645 WP_002984598.1 906727..907797(-) (xerS) [Streptococcus pyogenes strain NCTC12057]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGTCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCCTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGAGAGCCTTATTTTT
ATCGAAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806