Detailed information NTG1017653

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABX026_RS00595
• Genome accession: NZ_CP160075
• Coordinates: 123142..124320 (-)
• Length: 392 a.a.
• NCBI ID: WP_279027020.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Amel10
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 118142..129320

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABX026_RS00575 (ABX026_09405)	-	119240..119494 (-)	255	WP_037392355.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ABX026_RS00580 (ABX026_09410)	rsmD	119586..120158 (-)	573	WP_084586469.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABX026_RS00585 (ABX026_15170)	topA	120236..122530 (-)	2295	WP_371751030.1	type I DNA topoisomerase	-
ABX026_RS00590 (ABX026_09430)	-	122672..123130 (-)	459	WP_025329887.1	DUF494 family protein	-
ABX026_RS00595 (ABX026_09435)	dprA	123142..124320 (-)	1179	WP_279027020.1	DNA-processing protein DprA	Machinery gene
ABX026_RS00600 (ABX026_15175)	-	124705..125490 (+)	786	WP_084587022.1	DUF2071 domain-containing protein	-
ABX026_RS00605 (ABX026_09455)	ruvC	125588..126139 (-)	552	WP_037392368.1	crossover junction endodeoxyribonuclease RuvC	-
ABX026_RS00610 (ABX026_09460)	murU	126270..126971 (-)	702	WP_367424166.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
ABX026_RS00615 (ABX026_09465)	-	127104..128333 (-)	1230	WP_174831067.1	PilT/PilU family type 4a pilus ATPase	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42173.19 Da
• Isoelectric Point: 6.6279

>NTDB_id=1017653 ABX026_RS00595 WP_279027020.1 123142..124320(-) (dprA) [Snodgrassella alvi strain Amel10]
MDTQERLAWIELALTPFVGAETFLRIIKYFGSAQNALSASAAEISPFCQRQVSKYWHSDVAKQATEAAIEWERAHTDARL
LLLADNDFPAMLTKGLTPPPLLFVRGDSQCLHQPALSIVGSRHATPQAMRITHDFAAALARKGVTIISGMASGADTAAHQ
GALQAMGTTVAVWGTGIDRVYPARNKNLATQIAAHGCIISEFPLGTRPSPGNFPRRNRLIAALSQGTLVVEAATESGSLI
TARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLEDILQECPRLLQKKDLQSYSNRPHLQTDDISKSSTNTDS
SEDSLSVHSPDCILNPMEQQVLDGLGYGIMHPDMLVTALGMAATDVYAHLVTLELGGWITTLPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=1017653 ABX026_RS00595 WP_279027020.1 123142..124320(-) (dprA) [Snodgrassella alvi strain Amel10]
ATGGATACGCAAGAACGCTTAGCCTGGATTGAATTGGCATTAACTCCGTTTGTGGGGGCTGAAACTTTTCTTCGCATAAT
TAAATATTTTGGTTCCGCACAAAATGCTCTTAGTGCATCGGCTGCTGAAATATCGCCTTTTTGCCAACGGCAAGTCAGTA
AGTATTGGCATAGTGATGTAGCAAAACAGGCAACTGAAGCAGCTATAGAATGGGAGCGAGCGCATACTGATGCACGTTTA
TTACTACTGGCAGATAATGATTTTCCGGCAATGCTAACCAAGGGTTTAACACCGCCTCCATTATTGTTTGTTCGTGGTGA
TAGCCAGTGTTTGCATCAACCTGCTTTGTCAATTGTTGGCAGTCGGCATGCTACACCACAAGCCATGCGCATTACTCATG
ATTTTGCAGCCGCACTGGCACGGAAAGGTGTAACAATTATTTCAGGCATGGCTAGTGGCGCAGATACAGCAGCACATCAG
GGTGCTTTACAGGCAATGGGTACAACAGTGGCAGTTTGGGGTACAGGTATTGACAGAGTATATCCGGCACGCAACAAAAA
TTTAGCCACACAAATTGCTGCTCATGGCTGTATTATTTCTGAATTTCCCTTGGGTACTCGTCCTTCGCCCGGAAATTTTC
CGCGACGTAACCGCTTGATTGCTGCACTTAGTCAGGGTACGCTGGTAGTTGAAGCCGCAACTGAATCGGGCTCATTGATT
ACTGCAAGATTGGCTGGCGAAATGGGGCGGGAAGTTATGGCGATACCGGGTTCTATTGATAACCCTTTAAGTAAAGGCTG
TCACGCATTAATCAAACAGGGTGCCAAATTAGTAGAAAATCTGGAAGATATTTTGCAGGAATGTCCACGCCTCTTGCAAA
AAAAAGATTTGCAATCATATAGCAATCGTCCTCATCTGCAAACTGATGATATAAGTAAATCATCTACAAATACTGATAGT
TCAGAAGATTCATTATCAGTTCATTCACCAGATTGTATACTTAACCCGATGGAGCAGCAGGTGCTGGACGGACTGGGTTA
CGGCATAATGCATCCGGATATGTTAGTTACAGCACTTGGCATGGCTGCTACAGATGTGTATGCTCATCTCGTGACATTGG
AGCTTGGTGGCTGGATTACCACTCTGCCAGGCGGCTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (334-385)

• DNA recombination-mediator protein A (DNA_processg_A) (76-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.291	100	0.592
dprA	Neisseria meningitidis MC58	58.291	100	0.592
dprA	Neisseria gonorrhoeae strain FA1090	56.79	100	0.587
dprA	Neisseria gonorrhoeae MS11	56.543	100	0.584