Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   DQL07_RS05520 Genome accession   NZ_LS483327
Coordinates   1074738..1075400 (-) Length   220 a.a.
NCBI ID   WP_111702892.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12069     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1069738..1080400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL07_RS09760 (NCTC12069_01083) - 1070301..1070534 (-) 234 WP_002983979.1 hypothetical protein -
  DQL07_RS05505 (NCTC12069_01084) sodA 1070701..1071306 (-) 606 WP_002983977.1 superoxide dismutase SodA -
  DQL07_RS05510 (NCTC12069_01085) holA 1071403..1072443 (-) 1041 WP_011054659.1 DNA polymerase III subunit delta -
  DQL07_RS05515 (NCTC12069_01086) comEC/celB 1072514..1074757 (-) 2244 WP_111702891.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  DQL07_RS05520 (NCTC12069_01087) comEA/celA/cilE 1074738..1075400 (-) 663 WP_111702892.1 ComEA family DNA-binding protein Machinery gene
  DQL07_RS05525 (NCTC12069_01088) - 1075600..1076340 (-) 741 WP_012560804.1 lysophospholipid acyltransferase family protein -
  DQL07_RS05530 (NCTC12069_01089) - 1076458..1077234 (+) 777 WP_111702999.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  DQL07_RS05535 (NCTC12069_01090) - 1077224..1077502 (+) 279 WP_002989164.1 GIY-YIG nuclease family protein -
  DQL07_RS05540 (NCTC12069_01091) - 1077526..1079526 (-) 2001 WP_111702893.1 potassium transporter Kup -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24639.45 Da        Isoelectric Point: 6.7451

>NTDB_id=1017502 DQL07_RS05520 WP_111702892.1 1074738..1075400(-) (comEA/celA/cilE) [Streptococcus pyogenes strain NCTC12069]
MLDELLIKGKSFLRERYFLPYLISLLLGLFLILSFSFLFWGNRQSKAAVPALREISPVKQQVSEEKKEIQEDNSILVDLK
GAVQKEGVYKLTASSRVRDVIELAGGLTSEADKHAINFAEKLTDEQVVYVPKQGEEISVLPRSLVSGKKETSSKDQSKVH
INKASLEELQHIPGIGAKRAQDIIDMRDKLGGFKALEDLRQVSGIGEKTLEKLKDDIFLD

Nucleotide


Download         Length: 663 bp        

>NTDB_id=1017502 DQL07_RS05520 WP_111702892.1 1074738..1075400(-) (comEA/celA/cilE) [Streptococcus pyogenes strain NCTC12069]
ATGTTAGACGAATTATTAATTAAAGGAAAATCGTTTTTGAGAGAGCGGTATTTTCTGCCATACCTAATTAGTCTTTTATT
AGGACTTTTTCTAATACTAAGCTTCAGTTTTTTGTTCTGGGGAAATAGGCAGAGCAAGGCAGCCGTTCCTGCTTTGAGAG
AAATATCGCCTGTGAAACAGCAGGTTAGTGAAGAAAAAAAGGAAATTCAAGAAGATAACAGTATTTTAGTGGATTTAAAA
GGCGCCGTACAAAAAGAGGGAGTTTATAAGCTAACTGCTAGCAGTCGTGTGCGAGATGTCATTGAACTAGCTGGAGGCCT
AACTTCAGAAGCTGATAAACATGCTATTAATTTTGCAGAAAAACTAACTGATGAGCAAGTTGTTTATGTACCTAAACAAG
GAGAAGAGATTTCTGTGCTACCAAGGTCATTAGTTTCTGGTAAAAAAGAAACTTCCAGCAAGGATCAGTCAAAGGTTCAT
ATTAATAAGGCCAGCTTAGAAGAACTACAACATATCCCAGGTATTGGTGCTAAAAGAGCTCAGGATATTATTGATATGAG
AGATAAGTTAGGTGGTTTTAAAGCGTTAGAAGATCTCCGTCAGGTTTCGGGGATTGGCGAAAAAACGCTCGAGAAATTAA
AAGATGACATTTTCTTGGACTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(77-130)

Helix-hairpin-helix motif (HHH_3)

(156-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

42.995

94.091

0.405