Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE/blpR   Type   Regulator
Locus tag   DQL59_RS09005 Genome accession   NZ_LS483326
Coordinates   208415..208633 (+) Length   72 a.a.
NCBI ID   WP_072135532.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12045     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 203415..213633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL59_RS01195 (NCTC12045_00236) - 204423..204998 (+) 576 WP_009880369.1 uracil-DNA glycosylase family protein -
  DQL59_RS01200 (NCTC12045_00237) ybeY 205157..205654 (+) 498 WP_002985748.1 rRNA maturation RNase YbeY -
  DQL59_RS01205 (NCTC12045_00238) - 205635..206042 (+) 408 WP_002985746.1 diacylglycerol kinase family protein -
  DQL59_RS01210 (NCTC12045_00239) era 206162..207058 (+) 897 WP_111681004.1 GTPase Era -
  DQL59_RS01215 (NCTC12045_00240) - 207078..207554 (+) 477 WP_002985741.1 NUDIX hydrolase -
  DQL59_RS09000 (NCTC12045_00241) - 207860..208114 (-) 255 WP_011184258.1 hypothetical protein -
  DQL59_RS09005 comE/blpR 208415..208633 (+) 219 WP_072135532.1 LytTR family transcriptional regulator DNA-binding domain-containing protein Regulator
  DQL59_RS01235 (NCTC12045_00243) - 208830..210557 (-) 1728 Protein_198 peptide cleavage/export ABC transporter -
  DQL59_RS01240 (NCTC12045_00244) - 210840..211067 (+) 228 WP_002992018.1 Blp family class II bacteriocin -
  DQL59_RS01245 (NCTC12045_00245) - 211080..211280 (+) 201 WP_002990771.1 class IIb bacteriocin, lactobin A/cerein 7B family -
  DQL59_RS01265 (NCTC12045_00248) - 212294..212695 (+) 402 WP_111681006.1 hypothetical protein -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 8666.13 Da        Isoelectric Point: 10.5045

>NTDB_id=1017445 DQL59_RS09005 WP_072135532.1 208415..208633(+) (comE/blpR) [Streptococcus pyogenes strain NCTC12045]
MVLYSTRERIEFYGELSEIVKQEPRLFQCHRSFVVNPYNISSIQRLERKVYLKKRFILSSIKAKSYCSKRSS

Nucleotide


Download         Length: 219 bp        

>NTDB_id=1017445 DQL59_RS09005 WP_072135532.1 208415..208633(+) (comE/blpR) [Streptococcus pyogenes strain NCTC12045]
TTGGTTCTTTATTCTACTAGAGAAAGGATTGAATTTTATGGGGAGTTATCTGAAATCGTTAAGCAAGAACCAAGATTATT
TCAATGCCATCGATCATTTGTTGTTAATCCCTACAATATATCTTCAATACAACGATTAGAACGTAAGGTTTATTTAAAAA
AACGGTTCATCTTGTCTAGTATCAAGGCTAAAAGTTACTGCTCTAAAAGAAGCAGTTGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(3-55)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

56.604

73.611

0.417