Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQL05_RS06540 Genome accession   NZ_LS483322
Coordinates   1293983..1294792 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   A0A0H2UTH0
Organism   Streptococcus pyogenes strain NCTC12066     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1288983..1299792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL05_RS06530 (NCTC12066_01299) smc 1289308..1292847 (-) 3540 WP_030126774.1 chromosome segregation protein SMC -
  DQL05_RS06535 (NCTC12066_01300) rnc 1292848..1293540 (-) 693 WP_002990670.1 ribonuclease III -
  DQL05_RS06540 (NCTC12066_01301) vicX 1293983..1294792 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQL05_RS06545 (NCTC12066_01302) vicK 1294796..1296148 (-) 1353 WP_030126775.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL05_RS06550 (NCTC12066_01303) yycF 1296141..1296851 (-) 711 WP_002985645.1 response regulator YycF -
  DQL05_RS06555 (NCTC12066_01304) - 1297013..1298047 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DQL05_RS06560 (NCTC12066_01305) - 1298103..1299350 (-) 1248 WP_002995606.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1017142 DQL05_RS06540 WP_002985641.1 1293983..1294792(-) (vicX) [Streptococcus pyogenes strain NCTC12066]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1017142 DQL05_RS06540 WP_002985641.1 1293983..1294792(-) (vicX) [Streptococcus pyogenes strain NCTC12066]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACTATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UTH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758