Detailed information NTG1016900

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ABSY19_RS20110
• Genome accession: NZ_CP159956
• Coordinates: 4180746..4181774 (-)
• Length: 342 a.a.
• NCBI ID: WP_382155271.1
• Uniprot ID: -
• Organism: Hydrogenophaga sp. ANAO-22
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4175746..4186774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABSY19_RS20080 (ABSY19_20080)	-	4176383..4176766 (+)	384	WP_382155253.1	RidA family protein	-
ABSY19_RS20085 (ABSY19_20085)	-	4176772..4177479 (+)	708	WP_382155256.1	haloacid dehalogenase type II	-
ABSY19_RS20090 (ABSY19_20090)	-	4177484..4178272 (-)	789	WP_382155259.1	DUF4399 domain-containing protein	-
ABSY19_RS20095 (ABSY19_20095)	-	4178380..4179522 (-)	1143	WP_382155262.1	FAD-dependent oxidoreductase	-
ABSY19_RS20100 (ABSY19_20100)	-	4179530..4179850 (-)	321	WP_382155265.1	hypothetical protein	-
ABSY19_RS20105 (ABSY19_20105)	-	4179847..4180686 (-)	840	WP_382155268.1	undecaprenyl-diphosphate phosphatase	-
ABSY19_RS20110 (ABSY19_20110)	pilA	4180746..4181774 (-)	1029	WP_382155271.1	signal recognition particle-docking protein FtsY	Machinery gene
ABSY19_RS20115 (ABSY19_20115)	-	4181816..4183279 (+)	1464	WP_382155274.1	M16 family metallopeptidase	-
ABSY19_RS20120 (ABSY19_20120)	-	4183297..4184634 (+)	1338	WP_382155277.1	M16 family metallopeptidase	-
ABSY19_RS20125 (ABSY19_20125)	rsmD	4184655..4185269 (+)	615	WP_382155280.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABSY19_RS20130 (ABSY19_20130)	coaD	4185306..4185824 (+)	519	WP_382155283.1	pantetheine-phosphate adenylyltransferase	-
ABSY19_RS20135 (ABSY19_20135)	-	4185917..4186219 (+)	303	WP_291113989.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 35732.31 Da
• Isoelectric Point: 8.0806

>NTDB_id=1016900 ABSY19_RS20110 WP_382155271.1 4180746..4181774(-) (pilA) [Hydrogenophaga sp. ANAO-22]
MFSFFRKKALTPPTPALPEAPAPSPAAPAPAAAAPTPAAPAAAPRQGWLDKLKAGLRKTGSGIATVFTGTQIDDALYEEL
ESALLMADTGVKATTHLLSDLKRRVKESKTTDPAAVKGLLADAIADLLAPLQKPLVIGEHKPTVIMVAGVNGAGKTTSIG
KLTRHLADSGASVLLAAADTFRAAAREQLAVWADRNTVEIITQQGGDPAAVSFDAVTAGKARGRDVVLVDTAGRLPTQLH
LMEELRKIKRVVQKADAGAPHEVLLVIDGNTGQNALMQVKAFDEALQLTGLVITKLDGTAKGGVLCAIAREKPVPVYFIG
VGEKLEDLETFDAREFAQALLA

Nucleotide

• Length: 1029 bp

>NTDB_id=1016900 ABSY19_RS20110 WP_382155271.1 4180746..4181774(-) (pilA) [Hydrogenophaga sp. ANAO-22]
ATGTTCTCGTTCTTTCGCAAAAAAGCCCTCACCCCGCCCACGCCCGCCCTGCCTGAGGCCCCCGCGCCCTCGCCTGCGGC
GCCCGCGCCAGCCGCTGCGGCACCCACTCCGGCTGCGCCCGCGGCCGCGCCGCGCCAGGGCTGGCTGGACAAACTCAAGG
CCGGCCTGCGCAAGACCGGCTCGGGCATCGCCACGGTGTTCACCGGCACCCAGATCGACGATGCCCTTTACGAAGAGCTG
GAATCGGCCCTGCTGATGGCCGACACCGGCGTGAAGGCGACCACCCACCTGCTCAGCGACCTGAAACGCCGCGTGAAGGA
AAGCAAGACCACCGACCCGGCCGCCGTCAAGGGCCTGCTGGCGGATGCCATCGCCGACCTGCTCGCCCCGCTGCAGAAGC
CGCTGGTGATCGGCGAGCACAAACCCACCGTGATCATGGTCGCAGGCGTCAACGGCGCGGGCAAGACCACCTCCATCGGC
AAGCTCACGCGCCACCTGGCCGACAGCGGCGCCTCGGTGCTGCTCGCGGCGGCCGACACCTTCCGCGCCGCCGCGCGCGA
GCAGCTGGCTGTCTGGGCCGACCGCAACACGGTGGAAATCATCACCCAGCAAGGCGGCGACCCAGCCGCCGTGAGCTTCG
ACGCTGTGACCGCCGGCAAGGCACGCGGGCGCGACGTGGTGCTGGTGGACACCGCCGGGCGCCTGCCCACGCAGTTGCAC
CTGATGGAAGAGCTGCGCAAGATCAAGCGCGTGGTGCAGAAGGCCGATGCCGGCGCGCCGCACGAGGTGCTGCTGGTGAT
CGACGGCAACACCGGCCAGAACGCGCTCATGCAGGTGAAGGCCTTCGACGAGGCGCTGCAACTTACCGGCCTGGTCATCA
CCAAGCTCGACGGCACCGCCAAGGGCGGCGTGCTCTGCGCGATCGCGCGCGAGAAGCCGGTGCCGGTCTACTTCATCGGG
GTCGGCGAAAAGCTCGAAGACCTCGAAACCTTCGACGCGCGCGAATTCGCGCAGGCCCTGCTGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (61-123)

• SRP54-type protein, GTPase domain (SRP54) (142-341)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	59.667	87.719	0.523