Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABSY19_RS19140 Genome accession   NZ_CP159956
Coordinates   3979390..3979785 (+) Length   131 a.a.
NCBI ID   WP_297397748.1    Uniprot ID   -
Organism   Hydrogenophaga sp. ANAO-22     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3974390..3984785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABSY19_RS19115 (ABSY19_19120) purH 3974477..3976063 (+) 1587 WP_382154786.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  ABSY19_RS19120 (ABSY19_19125) - 3976270..3976689 (+) 420 WP_382154789.1 hypothetical protein -
  ABSY19_RS19125 (ABSY19_19130) hemL 3976703..3978007 (-) 1305 WP_382154791.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ABSY19_RS19130 (ABSY19_19135) - 3978018..3978959 (-) 942 WP_382154794.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  ABSY19_RS19135 (ABSY19_19140) - 3979115..3979288 (+) 174 WP_291120767.1 rubredoxin -
  ABSY19_RS19140 (ABSY19_19145) pilG 3979390..3979785 (+) 396 WP_297397748.1 PleD family two-component system response regulator Regulator
  ABSY19_RS19145 (ABSY19_19150) - 3979785..3980150 (+) 366 WP_291120771.1 PleD family two-component system response regulator -
  ABSY19_RS19150 (ABSY19_19155) - 3980180..3980719 (+) 540 WP_382154797.1 chemotaxis protein CheW -
  ABSY19_RS19155 (ABSY19_19160) - 3980784..3983030 (+) 2247 WP_382154800.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14396.60 Da        Isoelectric Point: 6.9487

>NTDB_id=1016899 ABSY19_RS19140 WP_297397748.1 3979390..3979785(+) (pilG) [Hydrogenophaga sp. ANAO-22]
MSTTPALKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKINDYQPDLVFCDILMPRLDGYQTCAIIKRNARFAS
IPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGANLTGAV

Nucleotide


Download         Length: 396 bp        

>NTDB_id=1016899 ABSY19_RS19140 WP_297397748.1 3979390..3979785(+) (pilG) [Hydrogenophaga sp. ANAO-22]
GTGAGCACAACGCCTGCCCTCAAAGTCCTGGTGGTTGACGACAGCAACACCATCCGCCGCAGCGCCGAGATTTTCCTCAA
GCAGGGCGGGCATGAAGTCCTGCTGGCCGACGACGGCTTCGACGCCCTGGCCAAGATCAACGACTACCAGCCCGATCTGG
TGTTCTGCGACATCCTCATGCCGCGCCTCGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCCCGCTTCGCCAGC
ATCCCCGTGGTGATGCTGTCGTCCAAGGACGGCGTGTTCGACAAGGCGCGTGGGCGCATGGTCGGCTCGCAGGACTACCT
CACCAAACCCTTTACCAAAGACCAGCTGCTGCAAGCCGTGCAGCAGTTCGGCGCCAACCTGACAGGAGCAGTGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

62.931

88.55

0.557

Multiple sequence alignment