Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABU614_RS01720 Genome accession   NZ_CP159925
Coordinates   385045..385443 (-) Length   132 a.a.
NCBI ID   WP_031372856.1    Uniprot ID   A0AAU8MXI9
Organism   Lysobacter firmicutimachus strain SR10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 380045..390443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABU614_RS01705 (ABU614_01705) - 382030..384048 (-) 2019 WP_064747631.1 methyl-accepting chemotaxis protein -
  ABU614_RS01710 (ABU614_01710) - 384100..384651 (-) 552 WP_064747630.1 chemotaxis protein CheW -
  ABU614_RS01715 (ABU614_01715) - 384660..385025 (-) 366 WP_064747629.1 response regulator -
  ABU614_RS01720 (ABU614_01720) pilG 385045..385443 (-) 399 WP_031372856.1 twitching motility response regulator PilG Regulator
  ABU614_RS01725 (ABU614_01725) gshB 385791..386753 (+) 963 WP_064747628.1 glutathione synthase -
  ABU614_RS01730 (ABU614_01730) - 386750..387631 (+) 882 WP_064747627.1 energy transducer TonB -
  ABU614_RS01735 (ABU614_01735) - 387654..388286 (-) 633 WP_363798628.1 hypothetical protein -
  ABU614_RS01740 (ABU614_01740) - 388387..389529 (-) 1143 WP_363798630.1 hypothetical protein -
  ABU614_RS01745 (ABU614_01745) tsaB 389561..390280 (-) 720 WP_336132495.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14822.24 Da        Isoelectric Point: 7.1364

>NTDB_id=1016813 ABU614_RS01720 WP_031372856.1 385045..385443(-) (pilG) [Lysobacter firmicutimachus strain SR10]
MLDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NQLFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVHA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1016813 ABU614_RS01720 WP_031372856.1 385045..385443(-) (pilG) [Lysobacter firmicutimachus strain SR10]
ATGCTCGACGAGGTTCGTAGCGGCAGCCTCGACGGTCTCAGGGTCATGGTGATCGACGATTCCAAGACCATCCGTCGAAC
CGCCGAGACGCTGTTGAAACGCGAAGGATGCGAGGTGGTCACGGCCATCGACGGATTCGAAGCGTTGGCCAAGATCGCCG
ATCAGCAGCCGCAAATCATTTTCGTGGATATCATGATGCCGCGTCTGGACGGTTATCAGACGTGCGCGCTCATCAAGAAC
AATCAACTGTTCAAGGGCACGCCGGTCATCATGCTGTCGTCCAAAGACGGCCTGTTCGACAAGGCCCGGGGCCGCATCGT
CGGTTCCGAGCAATACCTGACCAAGCCTTTCACGCGCGAGGAGCTCCTCGACGCGATCCGCAAGCACGTACACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.939

0.697

Multiple sequence alignment