Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ABXV02_RS19905 Genome accession   NZ_CP159912
Coordinates   3806999..3807139 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain PY79     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3801999..3812139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXV02_RS19900 - 3805881..3807053 (-) 1173 Protein_3882 condensation domain-containing protein -
  ABXV02_RS19905 comS 3806999..3807139 (-) 141 WP_010886404.1 competence protein ComS Regulator
  ABXV02_RS19910 srfAB 3807183..3810275 (-) 3093 Protein_3884 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=1016785 ABXV02_RS19905 WP_010886404.1 3806999..3807139(-) (comS) [Bacillus subtilis strain PY79]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1016785 ABXV02_RS19905 WP_010886404.1 3806999..3807139(-) (comS) [Bacillus subtilis strain PY79]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment