Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ABXV02_RS17385 Genome accession   NZ_CP159912
Coordinates   3308550..3309344 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain PY79     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3303550..3314344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXV02_RS17350 ephM 3304392..3305252 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  ABXV02_RS17355 spdL 3305239..3305571 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  ABXV02_RS17360 yfhK 3305656..3306174 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  ABXV02_RS17365 yfhJ 3306319..3306588 (-) 270 WP_003243789.1 YfhJ family protein -
  ABXV02_RS17370 sspK 3306713..3306865 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ABXV02_RS17375 yfhI 3306898..3308091 (-) 1194 WP_003243500.1 MFS transporter -
  ABXV02_RS17380 yfhH 3308234..3308548 (-) 315 WP_003244592.1 YfhH family protein -
  ABXV02_RS17385 recX 3308550..3309344 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  ABXV02_RS17390 yfhF 3309433..3310344 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  ABXV02_RS17395 yfhE 3310399..3310509 (+) 111 WP_003223230.1 YfhE family protein -
  ABXV02_RS17400 yfhD 3310576..3310767 (+) 192 WP_003233561.1 YfhD family protein -
  ABXV02_RS17405 yfhC 3310806..3311390 (-) 585 WP_003243940.1 nitroreductase -
  ABXV02_RS17410 yfhB 3311478..3312359 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  ABXV02_RS17415 sxzA 3312474..3313505 (-) 1032 WP_003243057.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=1016775 ABXV02_RS17385 WP_003243354.1 3308550..3309344(-) (recX) [Bacillus subtilis strain PY79]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1016775 ABXV02_RS17385 WP_003243354.1 3308550..3309344(-) (recX) [Bacillus subtilis strain PY79]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment