Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ABXV02_RS15740 Genome accession   NZ_CP159912
Coordinates   3003941..3005092 (-) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus subtilis strain PY79     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2998941..3010092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXV02_RS15715 cwlQ 2999080..2999814 (+) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -
  ABXV02_RS15720 bhbI 3000069..3000467 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ABXV02_RS15725 spxH 3000464..3001363 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  ABXV02_RS15730 - 3001677..3001844 (+) 168 WP_003244944.1 hypothetical protein -
  ABXV02_RS15735 pepF 3001882..3003711 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  ABXV02_RS15740 coiA 3003941..3005092 (-) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  ABXV02_RS15745 - 3005136..3005258 (+) 123 WP_003245684.1 hypothetical protein -
  ABXV02_RS15750 mecA 3005253..3005909 (-) 657 WP_003245194.1 adaptor protein MecA Regulator
  ABXV02_RS15755 - 3005876..3006016 (-) 141 WP_119122854.1 hypothetical protein -
  ABXV02_RS15760 yjbE 3006186..3006842 (+) 657 WP_003232944.1 TerC family protein -
  ABXV02_RS15765 spx 3006885..3007280 (-) 396 WP_003245483.1 transcriptional regulator Spx -
  ABXV02_RS15770 yjbC 3007461..3008039 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  ABXV02_RS15775 yjbB 3008203..3009420 (-) 1218 WP_010886478.1 MFS transporter -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=1016762 ABXV02_RS15740 WP_003245839.1 3003941..3005092(-) (coiA) [Bacillus subtilis strain PY79]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1016762 ABXV02_RS15740 WP_003245839.1 3003941..3005092(-) (coiA) [Bacillus subtilis strain PY79]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974


Multiple sequence alignment