Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ABXV02_RS14365 Genome accession   NZ_CP159912
Coordinates   2759949..2760413 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain PY79     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2754949..2765413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXV02_RS14345 fadH 2756137..2756901 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  ABXV02_RS14350 ppeE 2757044..2757904 (+) 861 WP_003232400.1 metallophosphoesterase -
  ABXV02_RS14355 ltdD 2757961..2758455 (+) 495 WP_010886500.1 L,D-transpeptidase family protein -
  ABXV02_RS14360 ykuC 2758531..2759823 (+) 1293 WP_003245267.1 MFS transporter -
  ABXV02_RS14365 kre 2759949..2760413 (+) 465 WP_003232406.1 YkyB family protein Regulator
  ABXV02_RS14370 cheV 2760457..2761368 (-) 912 WP_009967126.1 chemotaxis protein CheV -
  ABXV02_RS14375 - 2761572..2761733 (+) 162 WP_003245246.1 hypothetical protein -
  ABXV02_RS14380 dapX 2761935..2763116 (+) 1182 WP_003232415.1 aminotransferase A -
  ABXV02_RS14385 kinA 2763127..2764947 (-) 1821 WP_003245779.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1016758 ABXV02_RS14365 WP_003232406.1 2759949..2760413(+) (kre) [Bacillus subtilis strain PY79]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1016758 ABXV02_RS14365 WP_003232406.1 2759949..2760413(+) (kre) [Bacillus subtilis strain PY79]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment