Detailed information NTG1016730

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: DQM44_RS06190
• Genome accession: NZ_LS483318
• Coordinates: 1187490..1189697 (-)
• Length: 735 a.a.
• NCBI ID: WP_046166016.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1182490..1194697

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM44_RS06160 (NCTC5370_01275)	-	1182886..1183707 (-)	822	WP_022554832.1	ZIP family metal transporter	-
DQM44_RS06165 (NCTC5370_01276)	-	1183725..1184513 (-)	789	WP_003054664.1	Nif3-like dinuclear metal center hexameric protein	-
DQM44_RS06170 (NCTC5370_01277)	-	1184503..1185189 (-)	687	WP_012767134.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	-
DQM44_RS06175 (NCTC5370_01278)	nth	1185270..1185926 (-)	657	WP_003054655.1	endonuclease III	-
DQM44_RS06180 (NCTC5370_01279)	-	1185923..1186606 (-)	684	WP_022554834.1	DnaD domain-containing protein	-
DQM44_RS06185 (NCTC5370_01280)	-	1186824..1187342 (-)	519	WP_003054649.1	adenine phosphoribosyltransferase	-
DQM44_RS06190 (NCTC5370_01281)	recJ	1187490..1189697 (-)	2208	WP_046166016.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
DQM44_RS06195 (NCTC5370_01282)	-	1189694..1190458 (-)	765	WP_022554838.1	SDR family oxidoreductase	-
DQM44_RS06200 (NCTC5370_01283)	rnz	1190458..1191387 (-)	930	WP_003054662.1	ribonuclease Z	-
DQM44_RS06205 (NCTC5370_01284)	-	1191402..1192037 (-)	636	WP_044565432.1	cystathionine beta-lyase	-
DQM44_RS06210 (NCTC5370_01285)	hflX	1192030..1193268 (-)	1239	WP_022554840.1	GTPase HflX	-
DQM44_RS06215 (NCTC5370_01286)	miaA	1193356..1194240 (-)	885	WP_044565435.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
DQM44_RS06220 (NCTC5370_01287)	-	1194373..1194549 (+)	177	WP_003057835.1	DUF3042 family protein	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 81897.57 Da
• Isoelectric Point: 4.5663

>NTDB_id=1016730 DQM44_RS06190 WP_046166016.1 1187490..1189697(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
MIKSKYSWKIEDKKPDDGFFKLAKAKGLSQTAAQLIYERGIRTEEALDEFLTADLSQLHDPYLLHDMEKAVLRIRQAIED
GEQILVYGDYDADGMTSASIVKEALDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEALSYAQ
TQGIDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLTMLKHTERVGLQELMSLSSIDLDQFTEDAVGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKEKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMEAIGQTVIVLAIDNGFAKGSARSLEAINIFEALSG
NRDLFTAFGGHAGAAGMTLPVDNLEALSDLLCQFVIERGLDQTAKNTLTIDERLSLEDLSLDTLKSLDKLAPYGMDHPKP
IFYVKDIKVSQARAMGQDQSHLKFKVSQGKTSFDVLAFGQGSQLQDFQQATGLELAVTLSVNHWNGNTSLQLMLVDARVE
GVQLLDLRSKTAKLPEGIPTIEEDPNATVIVIKELPESFKDWRHQFADRTFDAIYFKNQMKHPYYLTGFGSREQFAKLYK
TIYQFPEFDVRHKLTDLSRYLNIDKLLLIKLIQIFEELAFVTIEDGLMTVNPQAQKRDISESRIYQELKELVKFQEIMAL
ASPQEMYDYLVNSKP

Nucleotide

• Length: 2208 bp

>NTDB_id=1016730 DQM44_RS06190 WP_046166016.1 1187490..1189697(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
ATGATTAAATCCAAATATAGTTGGAAAATAGAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAAGCAAAAGG
CCTGTCCCAGACCGCCGCTCAGTTGATTTACGAGCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGACCCTTATTTGCTACATGATATGGAAAAAGCTGTGCTAAGGATTCGTCAAGCCATTGAAGAT
GGTGAGCAGATTTTGGTTTACGGAGACTATGATGCTGATGGCATGACGTCGGCATCCATTGTCAAAGAAGCCTTAGACAT
GATGGGGGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTACGGCCCCAACCAAAGTGTTTATAAGTACT
TTATTGAGCAGGAGGCTGTCTCCTTAATTATAACAGTGGATAATGGAGTAGCTGGGCACGAAGCGCTTAGCTATGCCCAG
ACACAGGGAATTGATGTCATTGTAACTGACCATCATAGCCTGCCCGAAGAATTGCCAGAGGCCTTTGCCATCATTCACCC
TGAGCATCCCGATGCTGACTATCCTTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACTGCTTTGCTAG
AAAGTTTGCCAACAGACTGTCTAGATTTGGTAGCTATTGGAACCATTGCTGATATGGTAAGCTTGACAGGTGAAAACCGT
GTCTTGGTCAAAAATGGCTTGACCATGCTAAAACACACTGAAAGAGTGGGGTTGCAGGAACTGATGTCCTTGTCTTCTAT
TGATTTGGACCAATTTACGGAAGATGCTGTTGGGTTTCAGATTGCTCCCCAGTTGAATGCCTTAGGTCGTTTAGATGATC
CTAATCCAGCTATTGAGCTACTGACGGGCTTTGATGATCAAGAAGCCCAAGCGATTGCCTTGATGATTAAGGAAAAAAAT
GAAGAGCGTAAGGCTTTGGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCAGTTCAAGTCTT
AGCTCAAGCTGGTTGGCATCCAGGTGTGCTAGGTATTGTAGCGGGTCGCATTATGGAAGCCATTGGACAGACGGTCATTG
TCTTAGCTATTGATAACGGTTTTGCGAAAGGCTCGGCCAGAAGTTTAGAGGCCATTAATATATTTGAAGCCTTAAGTGGG
AATCGTGATCTTTTTACAGCTTTCGGTGGACATGCTGGTGCAGCTGGGATGACTTTGCCCGTGGATAATTTAGAAGCTTT
ATCGGACTTGCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCTAAAAATACGTTAACTATTGATGAAAGGC
TGTCTTTGGAGGATCTTAGTCTTGATACTTTAAAGAGTTTGGACAAACTAGCCCCCTATGGGATGGATCATCCTAAGCCA
ATCTTTTATGTTAAGGATATTAAAGTTAGTCAAGCGCGTGCCATGGGTCAAGACCAGAGTCATCTTAAATTCAAAGTCAG
CCAGGGTAAGACCTCCTTTGATGTTCTGGCTTTTGGTCAAGGAAGCCAACTACAAGACTTTCAACAAGCTACTGGTTTAG
AGTTAGCGGTAACTTTATCCGTCAACCACTGGAACGGCAATACCAGCCTTCAACTAATGTTGGTTGACGCTCGTGTTGAA
GGGGTGCAGTTGCTTGATTTACGGTCAAAAACAGCTAAACTACCCGAAGGTATTCCGACGATTGAGGAAGATCCCAATGC
AACAGTTATTGTTATTAAAGAGCTTCCAGAGTCTTTTAAAGACTGGCGTCATCAGTTCGCTGATAGAACCTTCGATGCCA
TTTATTTTAAAAATCAGATGAAACACCCCTATTACCTAACAGGTTTTGGAAGTCGTGAACAGTTTGCTAAACTCTATAAA
ACCATTTACCAATTTCCAGAATTTGATGTGCGTCATAAATTGACTGACTTGAGTCGCTACTTAAACATTGACAAACTTTT
ATTGATTAAGCTCATTCAGATTTTTGAAGAGCTAGCTTTTGTGACGATTGAAGATGGCCTGATGACAGTTAACCCACAAG
CGCAAAAGCGAGATATTTCTGAGAGTCGTATCTACCAAGAGCTAAAAGAACTCGTGAAGTTCCAAGAAATCATGGCCTTG
GCCAGTCCTCAAGAAATGTATGATTATTTGGTCAATTCGAAACCATAA

Domains

Predicted by InterProScan.

• DHHA1 domain (DHHA1) (317-435)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• DHH family (DHH) (83-228)

• RecJ OB domain (RecJ_OB) (450-556)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.919	100	0.644
recJ	Bacillus subtilis subsp. subtilis str. 168	35.723	100	0.38