Detailed information NTG1016689

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ABW387_RS04805
• Genome accession: NZ_CP159911
• Coordinates: 1106039..1106536 (-)
• Length: 165 a.a.
• NCBI ID: WP_370386204.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Amel02
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1101039..1111536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABW387_RS04795 (ABW387_07235)	waaA	1103055..1104344 (+)	1290	WP_367467262.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
ABW387_RS04800 (ABW387_17395)	-	1104527..1105516 (-)	990	WP_370386203.1	sulfatase-like hydrolase/transferase	-
ABW387_RS04805 (ABW387_17400)	pilA	1106039..1106536 (-)	498	WP_370386204.1	pilin	Machinery gene
ABW387_RS04810 (ABW387_07215)	-	1106649..1107110 (-)	462	WP_110414402.1	pilin	-
ABW387_RS04815 (ABW387_07210)	-	1107261..1107710 (-)	450	WP_367467256.1	pilin	-
ABW387_RS04820 (ABW387_07205)	-	1107991..1108794 (-)	804	WP_370386205.1	hypothetical protein	-
ABW387_RS04825 (ABW387_17405)	-	1109165..1110433 (+)	1269	WP_370386206.1	FepA family TonB-dependent siderophore receptor	-
ABW387_RS04830 (ABW387_17410)	-	1110443..1111393 (+)	951	WP_370386207.1	TonB-dependent receptor domain-containing protein	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 17460.08 Da
• Isoelectric Point: 9.0557

>NTDB_id=1016689 ABW387_RS04805 WP_370386204.1 1106039..1106536(-) (pilA) [Snodgrassella alvi strain Amel02]
MNFQPFCKMENNMKAFQKGFTLIELMIVIAIIGILAAIAVPAYSDYIARSQASEASSLAAGLKTQIIDNLQNNNCKSGDN
NALDTAIDQQTGKYGVAEIGGTAATGSLSANAPTGCTITYTVNSTKVSSSIAKKKLVLDVLKNGSLKKNANTDMPDKYIP
KAFTI

Nucleotide

• Length: 498 bp

>NTDB_id=1016689 ABW387_RS04805 WP_370386204.1 1106039..1106536(-) (pilA) [Snodgrassella alvi strain Amel02]
ATGAATTTTCAACCGTTTTGTAAGATGGAGAATAATATGAAAGCATTCCAAAAAGGTTTTACTTTAATTGAATTGATGAT
TGTAATTGCAATTATCGGTATTCTTGCTGCAATTGCCGTACCTGCTTACTCTGATTATATTGCCCGTTCTCAGGCTTCAG
AAGCTTCTAGCCTTGCTGCTGGTCTGAAAACTCAGATTATCGATAATTTGCAGAATAATAATTGTAAGTCAGGTGACAAT
AATGCACTTGATACCGCCATTGACCAACAAACTGGTAAATACGGTGTAGCAGAAATCGGTGGTACTGCCGCTACCGGCAG
TCTTTCTGCTAACGCTCCAACAGGCTGTACAATTACATATACAGTAAACTCAACCAAAGTATCTTCTTCTATTGCTAAAA
AGAAATTAGTATTAGATGTATTGAAAAATGGTTCACTGAAGAAAAATGCAAATACAGATATGCCTGATAAATATATACCT
AAAGCATTCACAATCTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (17-39)

• Pilin (bacterial filament) (Pilin) (48-162)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Acinetobacter nosocomialis M2	54.422	89.091	0.485