Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ABG809_RS02720 Genome accession   NZ_CP159893
Coordinates   582163..582936 (+) Length   257 a.a.
NCBI ID   WP_016356271.1    Uniprot ID   A0A3L8GC69
Organism   Streptococcus iniae strain QMA0177     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 577163..587936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABG809_RS02700 (ABG809_02700) - 579799..579915 (-) 117 Protein_514 IS30 family transposase -
  ABG809_RS02710 (ABG809_02710) rlmH 580259..580738 (-) 480 WP_003100536.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ABG809_RS02715 (ABG809_02715) - 580884..582084 (+) 1201 Protein_516 S1C family serine protease -
  ABG809_RS02720 (ABG809_02720) spo0J 582163..582936 (+) 774 WP_016356271.1 ParB/RepB/Spo0J family partition protein Regulator
  ABG809_RS02725 (ABG809_02725) dnaA 583169..584524 (+) 1356 WP_003100539.1 chromosomal replication initiator protein DnaA -
  ABG809_RS02730 (ABG809_02730) dnaN 584680..585819 (+) 1140 WP_121791631.1 DNA polymerase III subunit beta -
  ABG809_RS02735 (ABG809_02735) - 585878..586075 (+) 198 WP_003100542.1 DUF951 domain-containing protein -
  ABG809_RS02740 (ABG809_02740) ychF 586304..587422 (+) 1119 WP_016355730.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29021.40 Da        Isoelectric Point: 9.9391

>NTDB_id=1016646 ABG809_RS02720 WP_016356271.1 582163..582936(+) (spo0J) [Streptococcus iniae strain QMA0177]
MTETYKKIAIKDIVANPYQPRLHFNEDELKELAASISLNGLIQPIIVRKSEVFGYELIAGERRLRASQIAGLTEIPAIIK
TISNSESMNQAIIENLQRSNLNPIEEAKAFQSIIDKNQLTHDQLAAYMGKSRPYITNTIRLLQLSTSVLDAIEKKTISSG
HARSLLALSTKEEQDKYLNYIISQNLNVRQTESLIRKSKVKKEKKKEKTLFTKAIENELAKSLGLAVSISLNKDGSGQCH
FTFHNDDELNRIINKLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1016646 ABG809_RS02720 WP_016356271.1 582163..582936(+) (spo0J) [Streptococcus iniae strain QMA0177]
ATGACAGAAACATATAAAAAAATAGCCATTAAAGATATTGTTGCTAATCCTTATCAACCAAGATTACATTTTAATGAAGA
TGAGTTAAAAGAATTAGCAGCATCAATTTCTTTAAATGGTTTAATTCAGCCAATTATCGTCCGTAAATCTGAAGTCTTTG
GTTATGAATTAATTGCTGGTGAAAGAAGATTAAGAGCTTCTCAAATAGCAGGTTTAACTGAAATACCTGCTATTATCAAA
ACTATTTCTAATAGTGAGAGTATGAATCAAGCTATTATTGAAAATTTACAACGTTCCAATTTAAATCCAATAGAAGAAGC
TAAAGCTTTTCAAAGTATTATTGATAAAAATCAATTAACCCATGATCAATTAGCAGCATATATGGGGAAATCTAGACCTT
ATATTACAAATACAATTAGACTCTTACAATTATCCACATCTGTTCTAGATGCCATTGAAAAAAAGACAATAAGTTCTGGC
CACGCACGCAGCCTTCTAGCACTCTCAACTAAGGAAGAACAAGATAAATATCTTAATTATATTATCAGTCAAAACTTAAA
TGTTCGACAAACAGAATCTCTTATTCGAAAGAGTAAGGTTAAAAAAGAAAAGAAAAAAGAAAAGACACTTTTTACAAAAG
CTATTGAAAATGAGCTTGCTAAATCACTTGGACTAGCAGTTTCAATTTCCTTAAACAAAGATGGTAGTGGGCAGTGTCAT
TTTACTTTTCACAACGACGACGAATTAAACAGAATTATCAACAAGCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-197)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3L8GC69

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.25

99.611

0.56

Multiple sequence alignment