Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ABG809_RS02325 Genome accession   NZ_CP159893
Coordinates   506487..507200 (+) Length   237 a.a.
NCBI ID   WP_003100405.1    Uniprot ID   A0A3L8GBZ9
Organism   Streptococcus iniae strain QMA0177     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 501487..512200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABG809_RS02315 (ABG809_02315) treC 502616..504241 (-) 1626 WP_003100403.1 alpha,alpha-phosphotrehalase -
  ABG809_RS02320 (ABG809_02320) treP 504306..506282 (-) 1977 WP_061866600.1 PTS system trehalose-specific EIIBC component -
  ABG809_RS02325 (ABG809_02325) treR 506487..507200 (+) 714 WP_003100405.1 trehalose operon repressor Regulator
  ABG809_RS02330 (ABG809_02330) yaaA 507259..507990 (+) 732 WP_031239270.1 peroxide stress protein YaaA -
  ABG809_RS02335 (ABG809_02335) nrdG 508094..508713 (-) 620 Protein_443 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ABG809_RS02340 (ABG809_02340) - 508723..509223 (-) 501 WP_003100408.1 GNAT family N-acetyltransferase -
  ABG809_RS02345 (ABG809_02345) - 509234..510165 (-) 932 Protein_445 Gfo/Idh/MocA family protein -
  ABG809_RS02350 (ABG809_02350) - 510194..510340 (-) 147 WP_003100410.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27483.80 Da        Isoelectric Point: 9.5104

>NTDB_id=1016644 ABG809_RS02325 WP_003100405.1 506487..507200(+) (treR) [Streptococcus iniae strain QMA0177]
MKKYESIFKDLETKISKEVYAIDDFLPTEIELSKDYNVSRDTIRKALNLLAKAGLVKKQQGRGTQVIKHHHILFPISELT
SYQELVSYFDMDSKTNVIAIDKLIVDPKMEKLTGFPTHSLVWRVTRQRVVDGVASVLDIDYLDKDIVPNMTREIAQISLY
AFLEKDLKLSIDFALKEVTIDQVNDRDKILLDLGSDKHVVSVKSKVYLSNNKQFQFTESRHKLEKFKFVDFARRNPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1016644 ABG809_RS02325 WP_003100405.1 506487..507200(+) (treR) [Streptococcus iniae strain QMA0177]
ATGAAGAAATACGAAAGCATTTTTAAAGACCTCGAAACAAAAATTTCAAAAGAAGTTTATGCCATAGATGACTTTTTACC
AACTGAAATCGAATTAAGTAAAGACTATAATGTTAGTAGGGATACTATTCGAAAAGCACTCAATCTTTTAGCAAAAGCTG
GTTTGGTCAAAAAACAACAAGGTCGAGGAACACAGGTGATTAAACACCACCATATTTTATTTCCTATATCTGAATTAACA
AGTTACCAAGAACTTGTTTCCTATTTTGATATGGATTCTAAAACCAACGTGATTGCTATTGACAAACTCATTGTTGATCC
TAAAATGGAAAAGTTGACTGGCTTTCCAACACATTCACTGGTTTGGCGCGTTACCAGACAAAGAGTGGTAGACGGGGTTG
CCTCTGTATTGGATATCGACTATTTGGACAAGGATATTGTGCCAAATATGACAAGGGAAATCGCCCAAATATCACTTTAT
GCCTTCTTGGAAAAAGACTTAAAACTGTCTATTGATTTTGCTCTAAAGGAAGTCACTATCGATCAAGTCAATGACCGAGA
TAAAATTCTATTAGATCTTGGTTCAGACAAACATGTGGTTTCTGTCAAATCTAAAGTATACCTCTCAAATAACAAGCAAT
TTCAATTTACTGAAAGCCGACATAAATTAGAGAAATTCAAATTTGTTGATTTTGCAAGACGCAATCCCAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(92-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3L8GBZ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.66

99.156

0.671

Multiple sequence alignment