Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DQL75_RS02030 Genome accession   NZ_LS483317
Coordinates   413189..414034 (+) Length   281 a.a.
NCBI ID   WP_111761889.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC5663     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 408189..419034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL75_RS02010 (NCTC5663_00383) - 408457..410298 (-) 1842 WP_111761887.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  DQL75_RS02015 (NCTC5663_00384) metC 410267..411427 (-) 1161 WP_111761888.1 cystathionine beta-lyase MetC -
  DQL75_RS02020 (NCTC5663_00385) - 411424..412527 (-) 1104 WP_000655692.1 PLP-dependent transferase -
  DQL75_RS02030 (NCTC5663_00387) spo0J 413189..414034 (+) 846 WP_111761889.1 ParB/RepB/Spo0J family partition protein Regulator
  DQL75_RS02035 (NCTC5663_00388) - 414188..415069 (+) 882 WP_111761890.1 mechanosensitive ion channel family protein -
  DQL75_RS02040 (NCTC5663_00389) - 415099..415302 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  DQL75_RS02045 (NCTC5663_00390) ychF 415314..416411 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  DQL75_RS02050 (NCTC5663_00391) - 416497..416688 (-) 192 WP_001052483.1 hypothetical protein -
  DQL75_RS02060 (NCTC5663_00392) rpsF 416932..417228 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  DQL75_RS02065 (NCTC5663_00393) ssbA 417249..417752 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  DQL75_RS02070 (NCTC5663_00394) rpsR 417804..418046 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32811.85 Da        Isoelectric Point: 10.0000

>NTDB_id=1016594 DQL75_RS02030 WP_111761889.1 413189..414034(+) (spo0J) [Staphylococcus aureus strain NCTC5663]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETEKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=1016594 DQL75_RS02030 WP_111761889.1 413189..414034(+) (spo0J) [Staphylococcus aureus strain NCTC5663]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTACAAGGCTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTCAGATATTTAGAAAATCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGAAAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381