Detailed information NTG1016466

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQL11_RS04470
• Genome accession: NZ_LS483315
• Coordinates: 868075..869145 (+)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain NCTC12059
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 863075..874145

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL11_RS04450 (NCTC12059_00886)	-	864080..864778 (+)	699	WP_002989743.1	GntR family transcriptional regulator	-
DQL11_RS04455 (NCTC12059_00887)	-	864876..865208 (+)	333	WP_002989745.1	putative DNA-binding protein	-
DQL11_RS04460 (NCTC12059_00888)	ffh	865223..866785 (+)	1563	WP_014407597.1	signal recognition particle protein	-
DQL11_RS04465 (NCTC12059_00889)	-	866902..867600 (-)	699	WP_002993300.1	XRE family transcriptional regulator	-
DQL11_RS04470 (NCTC12059_00890)	xerS	868075..869145 (+)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
DQL11_RS04475 (NCTC12059_00891)	-	869845..870327 (+)	483	WP_002984600.1	PASTA domain-containing protein	-
DQL11_RS04480 (NCTC12059_00892)	citC	870416..871468 (+)	1053	WP_110002537.1	[citrate (pro-3S)-lyase] ligase	-
DQL11_RS04485 (NCTC12059_00893)	-	871579..872973 (-)	1395	WP_172449811.1	oxaloacetate decarboxylase subunit alpha	-
DQL11_RS04490 (NCTC12059_00894)	citX	872988..873566 (-)	579	WP_030126674.1	citrate lyase holo-[acyl-carrier protein] synthase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=1016466 DQL11_RS04470 WP_002984598.1 868075..869145(+) (xerS) [Streptococcus pyogenes strain NCTC12059]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=1016466 DQL11_RS04470 WP_002984598.1 868075..869145(+) (xerS) [Streptococcus pyogenes strain NCTC12059]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCCTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806