Detailed information NTG1016376

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: ABYM97_RS11615
• Genome accession: NZ_CP159874
• Coordinates: 2218426..2218704 (+)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis strain PY79
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 2213426..2223704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABYM97_RS11595 (ABYM97_11595)	panEB	2214613..2215524 (+)	912	WP_003245639.1	ketopantoate reductase family protein	-
ABYM97_RS11600 (ABYM97_11600)	ampS	2215558..2216790 (-)	1233	WP_003232341.1	aminopeptidase	-
ABYM97_RS11605 (ABYM97_11605)	ykpC	2216900..2217034 (-)	135	WP_003238865.1	protein YkpC	-
ABYM97_RS11610 (ABYM97_11610)	mreBH	2217135..2218142 (-)	1008	WP_003245743.1	cell shape-determining protein MreBH	-
ABYM97_RS11615 (ABYM97_11615)	abrB	2218426..2218704 (+)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
ABYM97_RS11620 (ABYM97_11620)	kinC	2218894..2220180 (+)	1287	WP_003232333.1	two-component sensor histidine kinase KinC	-
ABYM97_RS11625 (ABYM97_11625)	ykqA	2220196..2221029 (+)	834	WP_003245146.1	gamma-glutamylcyclotransferase	-
ABYM97_RS11630 (ABYM97_11630)	ktrC	2221092..2221757 (+)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-
ABYM97_RS11635 (ABYM97_11635)	ade	2221912..2223645 (+)	1734	WP_003245362.1	adenine deaminase	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=1016376 ABYM97_RS11615 WP_003244728.1 2218426..2218704(+) (abrB) [Bacillus subtilis strain PY79]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=1016376 ABYM97_RS11615 WP_003244728.1 2218426..2218704(+) (abrB) [Bacillus subtilis strain PY79]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576