Detailed information NTG1016365

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABYM97_RS09890
• Genome accession: NZ_CP159874
• Coordinates: 1907186..1908139 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis strain PY79
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1902186..1913139

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABYM97_RS09865 (ABYM97_09865)	argF	1904018..1904977 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
ABYM97_RS09870 (ABYM97_09870)	yjzC	1905063..1905242 (+)	180	WP_003245356.1	YjzC family protein	-
ABYM97_RS09875 (ABYM97_09875)	yjzD	1905288..1905473 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
ABYM97_RS09880 (ABYM97_09880)	-	1905722..1906456 (+)	735	WP_003245223.1	hypothetical protein	-
ABYM97_RS09885 (ABYM97_09885)	-	1906538..1907095 (+)	558	WP_003232974.1	hypothetical protein	-
ABYM97_RS09890 (ABYM97_09890)	med	1907186..1908139 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
ABYM97_RS09895 (ABYM97_09895)	comZ	1908154..1908345 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ABYM97_RS09900 (ABYM97_09900)	yjzB	1908375..1908614 (-)	240	WP_003232972.1	spore coat protein YjzB	-
ABYM97_RS09905 (ABYM97_09905)	fabH	1908779..1909717 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ABYM97_RS09910 (ABYM97_09910)	fabF	1909740..1910981 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
ABYM97_RS09915 (ABYM97_09915)	yjaZ	1911057..1911842 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
ABYM97_RS09920 (ABYM97_09920)	appD	1912034..1913020 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=1016365 ABYM97_RS09890 WP_003245494.1 1907186..1908139(+) (med) [Bacillus subtilis strain PY79]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1016365 ABYM97_RS09890 WP_003245494.1 1907186..1908139(+) (med) [Bacillus subtilis strain PY79]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1