Detailed information NTG1016263

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABNX04_RS05645
• Genome accession: NZ_CP159868
• Coordinates: 1153343..1154296 (+)
• Length: 317 a.a.
• NCBI ID: WP_007409125.1
• Uniprot ID: A7Z3B8
• Organism: Bacillus velezensis strain JLU-1
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1148343..1159296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNX04_RS05620 (ABNX04_05620)	argF	1150161..1151132 (+)	972	WP_038457606.1	ornithine carbamoyltransferase	-
ABNX04_RS05625 (ABNX04_05625)	-	1151208..1151387 (+)	180	WP_003155070.1	YjzC family protein	-
ABNX04_RS05630 (ABNX04_05630)	-	1151424..1151609 (-)	186	WP_007409129.1	YjzD family protein	-
ABNX04_RS05635 (ABNX04_05635)	-	1151870..1152604 (+)	735	WP_038457610.1	hypothetical protein	-
ABNX04_RS05640 (ABNX04_05640)	-	1152687..1153253 (+)	567	WP_038457612.1	hypothetical protein	-
ABNX04_RS05645 (ABNX04_05645)	med	1153343..1154296 (+)	954	WP_007409125.1	BMP family ABC transporter substrate-binding protein	Regulator
ABNX04_RS05650 (ABNX04_05650)	comZ	1154309..1154500 (+)	192	WP_003155061.1	ComZ family protein	Regulator
ABNX04_RS05655 (ABNX04_05655)	-	1154529..1154747 (-)	219	WP_007610579.1	hypothetical protein	-
ABNX04_RS05660 (ABNX04_05660)	-	1154915..1155853 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
ABNX04_RS05665 (ABNX04_05665)	fabF	1155875..1157113 (+)	1239	WP_007610580.1	beta-ketoacyl-ACP synthase II	-
ABNX04_RS05670 (ABNX04_05670)	-	1157196..1157981 (+)	786	WP_029325951.1	DUF2268 domain-containing protein	-
ABNX04_RS05675 (ABNX04_05675)	-	1158155..1159141 (+)	987	WP_038457614.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.99 Da
• Isoelectric Point: 4.6686

>NTDB_id=1016263 ABNX04_RS05645 WP_007409125.1 1153343..1154296(+) (med) [Bacillus velezensis strain JLU-1]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1016263 ABNX04_RS05645 WP_007409125.1 1153343..1154296(+) (med) [Bacillus velezensis strain JLU-1]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGTGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAACCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAAAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTGGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGAACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A7Z3B8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785