Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ABNX04_RS04220 Genome accession   NZ_CP159868
Coordinates   892017..892808 (+) Length   263 a.a.
NCBI ID   WP_029325989.1    Uniprot ID   -
Organism   Bacillus velezensis strain JLU-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 887017..897808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNX04_RS04195 (ABNX04_04195) - 889011..889895 (+) 885 WP_038457354.1 PhzF family phenazine biosynthesis isomerase -
  ABNX04_RS04200 (ABNX04_04200) - 889972..890556 (+) 585 WP_038457355.1 nitroreductase -
  ABNX04_RS04205 (ABNX04_04205) - 890596..890787 (-) 192 WP_003155508.1 YfhD family protein -
  ABNX04_RS04210 (ABNX04_04210) - 890858..890968 (-) 111 WP_003155504.1 YfhE family protein -
  ABNX04_RS04215 (ABNX04_04215) - 891026..891925 (-) 900 WP_038457356.1 TIGR01777 family oxidoreductase -
  ABNX04_RS04220 (ABNX04_04220) recX 892017..892808 (+) 792 WP_029325989.1 recombination regulator RecX Regulator
  ABNX04_RS04225 (ABNX04_04225) - 892815..893129 (+) 315 WP_007408553.1 YfhH family protein -
  ABNX04_RS04230 (ABNX04_04230) - 893274..894467 (+) 1194 WP_025284446.1 MFS transporter -
  ABNX04_RS04235 (ABNX04_04235) - 894507..894896 (-) 390 WP_039062791.1 DUF2606 family protein -
  ABNX04_RS04240 (ABNX04_04240) - 894859..895770 (-) 912 WP_335404184.1 serine protease -
  ABNX04_RS04245 (ABNX04_04245) - 895915..896067 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  ABNX04_RS04250 (ABNX04_04250) - 896191..896460 (+) 270 WP_003155492.1 YfhJ family protein -
  ABNX04_RS04255 (ABNX04_04255) - 896592..897119 (+) 528 WP_106080348.1 SH3 domain-containing protein -
  ABNX04_RS04260 (ABNX04_04260) - 897205..897540 (+) 336 WP_003155488.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31020.21 Da        Isoelectric Point: 6.0921

>NTDB_id=1016255 ABNX04_RS04220 WP_029325989.1 892017..892808(+) (recX) [Bacillus velezensis strain JLU-1]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRYDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1016255 ABNX04_RS04220 WP_029325989.1 892017..892808(+) (recX) [Bacillus velezensis strain JLU-1]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTATGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGCGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAAACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.087

100

0.791

Multiple sequence alignment