Detailed information NTG0101616

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: APECO2_RS25115
• Genome accession: NZ_CP006834
• Coordinates: 4818906..4819931 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli APEC O2-211
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4813906..4824931

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APECO2_RS25095 (APECO2_20080)	metJ	4815091..4815408 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
APECO2_RS25100 (APECO2_20085)	yiiX	4815468..4816076 (+)	609	WP_000702299.1	YiiX family permuted papain-like enzyme	-
APECO2_RS25105 (APECO2_20090)	rpmE	4816137..4816349 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
APECO2_RS25110 (APECO2_20095)	priA	4816552..4818750 (+)	2199	WP_001318166.1	primosomal protein N'	Machinery gene
APECO2_RS25115 (APECO2_20100)	cytR	4818906..4819931 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
APECO2_RS25120 (APECO2_20105)	ftsN	4820023..4820982 (+)	960	WP_000068818.1	cell division protein FtsN	-
APECO2_RS25125 (APECO2_20110)	hslV	4821075..4821605 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
APECO2_RS25130 (APECO2_20115)	hslU	4821615..4822946 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
APECO2_RS25135 (APECO2_20120)	menA	4823013..4823939 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
APECO2_RS25140 (APECO2_20125)	rraA	4824032..4824517 (+)	486	WP_000872909.1	ribonuclease E activity regulator RraA	-
APECO2_RS25145 (APECO2_20130)	zapB	4824602..4824847 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=101616 APECO2_RS25115 WP_000644904.1 4818906..4819931(+) (cytR) [Escherichia coli APEC O2-211]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=101616 APECO2_RS25115 WP_000644904.1 4818906..4819931(+) (cytR) [Escherichia coli APEC O2-211]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628