Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DQL85_RS03365 Genome accession   NZ_LS483308
Coordinates   676812..677486 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain NCTC13137     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 671812..682486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL85_RS03335 (NCTC13137_00618) - 672027..673094 (+) 1068 WP_000980137.1 membrane protein -
  DQL85_RS03340 (NCTC13137_00619) - 673245..674288 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  DQL85_RS03350 (NCTC13137_00620) - 674617..675045 (+) 429 WP_000198504.1 hypothetical protein -
  DQL85_RS03355 (NCTC13137_00621) - 675254..675760 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  DQL85_RS03360 (NCTC13137_00622) graX 675873..676796 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  DQL85_RS03365 (NCTC13137_00623) braR 676812..677486 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  DQL85_RS03370 (NCTC13137_00624) graS 677479..678519 (+) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  DQL85_RS03375 (NCTC13137_00625) vraF 678663..679424 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  DQL85_RS03380 (NCTC13137_00626) vraG 679414..681301 (+) 1888 Protein_619 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=1016069 DQL85_RS03365 WP_001166505.1 676812..677486(+) (braR) [Staphylococcus aureus strain NCTC13137]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=1016069 DQL85_RS03365 WP_001166505.1 676812..677486(+) (braR) [Staphylococcus aureus strain NCTC13137]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402