Detailed information NTG1015940

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ABXT44_RS06495
• Genome accession: NZ_CP159805
• Coordinates: 1278961..1279914 (+)
• Length: 317 a.a.
• NCBI ID: WP_416686417.1
• Uniprot ID: -
• Organism: Candidatus Pseudothioglobus sp. Uisw_041
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1273961..1284914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXT44_RS06465 (ABXT44_06465)	-	1273964..1274821 (+)	858	WP_416686413.1	transporter substrate-binding domain-containing protein	-
ABXT44_RS06470 (ABXT44_06470)	-	1274868..1275845 (+)	978	WP_416686414.1	amino acid ABC transporter permease	-
ABXT44_RS06475 (ABXT44_06475)	-	1275848..1276603 (+)	756	WP_271541071.1	amino acid ABC transporter ATP-binding protein	-
ABXT44_RS06480 (ABXT44_06480)	ltaE	1276608..1277669 (-)	1062	WP_416686415.1	low-specificity L-threonine aldolase	-
ABXT44_RS06485 (ABXT44_06485)	-	1277683..1278339 (-)	657	WP_416686416.1	hypothetical protein	-
ABXT44_RS06490 (ABXT44_06490)	hemJ	1278386..1278811 (-)	426	WP_416651297.1	protoporphyrinogen oxidase HemJ	-
ABXT44_RS06495 (ABXT44_06495)	pilA	1278961..1279914 (+)	954	WP_416686417.1	signal recognition particle-docking protein FtsY	Machinery gene
ABXT44_RS06500 (ABXT44_06500)	-	1279924..1280214 (-)	291	WP_416686418.1	4a-hydroxytetrahydrobiopterin dehydratase	-
ABXT44_RS06505 (ABXT44_06505)	hemC	1280216..1281133 (-)	918	WP_416688457.1	hydroxymethylbilane synthase	-
ABXT44_RS06510 (ABXT44_06510)	argH	1281349..1282734 (+)	1386	WP_416686419.1	argininosuccinate lyase	-
ABXT44_RS06515 (ABXT44_06515)	fmt	1282734..1283663 (+)	930	WP_416686420.1	methionyl-tRNA formyltransferase	-
ABXT44_RS06520 (ABXT44_06520)	-	1283674..1284123 (-)	450	WP_416686421.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 34581.84 Da
• Isoelectric Point: 6.5181

>NTDB_id=1015940 ABXT44_RS06495 WP_416686417.1 1278961..1279914(+) (pilA) [Candidatus Pseudothioglobus sp. Uisw_041]
MLNFFKKNQSPESEGETKKPSLKDRLFKSKTKLGDGLSSLLMGKKKIDEALLEDLEMLLIGADIGIQTTDKVIESVRKKA
SRKELKDSDGLYELIKIELESFLIKENLLQTNVDKTFVILVVGINGAGKTTTIGKLAKLFQSEGKSVMLAAGDTFRAAAV
EQLQVWGERNDIPVIAQKTGADAASVVYDAYQSAIAKNIDILIADTAGRLHTQNNLMQELEKIKRVLKKHNEDAPHETLL
VIDGGSGQNAIQQANEFHKSINLSGLAVTKLDGTAKGGVLFAISDSLKLPIRFIGVGEAIDDLKPFNAKDFVDALFD

Nucleotide

• Length: 954 bp

>NTDB_id=1015940 ABXT44_RS06495 WP_416686417.1 1278961..1279914(+) (pilA) [Candidatus Pseudothioglobus sp. Uisw_041]
ATGCTAAACTTTTTTAAAAAAAATCAAAGCCCTGAGTCTGAAGGTGAGACAAAAAAACCTTCACTAAAAGATCGGCTATT
CAAATCCAAAACTAAACTTGGAGATGGTCTTTCATCCCTTCTTATGGGTAAAAAGAAAATAGATGAAGCACTTCTTGAAG
ATTTAGAAATGCTTTTAATTGGAGCAGATATAGGTATTCAAACAACTGACAAGGTTATTGAATCTGTGAGAAAAAAAGCA
TCTAGAAAAGAACTTAAGGACAGTGATGGTCTTTATGAACTTATAAAAATTGAACTTGAATCATTCTTAATTAAAGAAAA
TTTACTACAAACAAATGTTGATAAAACTTTTGTTATTCTTGTTGTTGGTATCAATGGTGCTGGAAAAACTACCACGATTG
GTAAGCTTGCTAAGCTATTTCAAAGTGAGGGAAAATCTGTAATGCTTGCAGCTGGAGACACTTTTCGTGCTGCTGCTGTT
GAGCAGCTTCAAGTTTGGGGAGAGAGGAATGATATTCCAGTCATCGCTCAAAAAACAGGGGCAGACGCAGCCTCGGTTGT
ATATGATGCTTACCAGTCAGCGATTGCTAAAAATATTGATATCTTAATTGCAGATACTGCAGGAAGACTTCATACACAAA
ATAATTTAATGCAAGAGCTTGAAAAAATTAAGAGAGTACTTAAAAAGCATAATGAAGATGCACCACATGAAACTCTCTTA
GTTATCGATGGTGGGTCAGGTCAAAATGCGATTCAACAAGCAAATGAATTTCATAAATCCATTAACCTATCAGGACTCGC
CGTCACTAAACTTGATGGAACAGCTAAAGGTGGAGTTTTATTTGCAATTTCAGACTCTCTTAAACTGCCTATTCGTTTTA
TTGGGGTTGGGGAAGCAATCGATGATTTAAAACCTTTTAATGCAAAAGATTTTGTTGATGCTTTATTTGATTAG

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (33-99)

• SRP54-type protein, GTPase domain (SRP54) (117-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.645	95.899	0.495