Detailed information NTG1015929

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ABXT51_RS06615
• Genome accession: NZ_CP159804
• Coordinates: 1307537..1308490 (+)
• Length: 317 a.a.
• NCBI ID: WP_416694697.1
• Uniprot ID: -
• Organism: Candidatus Pseudothioglobus sp. Uisw_050_01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1302537..1313490

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXT51_RS06585 (ABXT51_06585)	-	1302538..1303395 (+)	858	WP_416677474.1	transporter substrate-binding domain-containing protein	-
ABXT51_RS06590 (ABXT51_06590)	-	1303442..1304419 (+)	978	WP_271541069.1	amino acid ABC transporter permease	-
ABXT51_RS06595 (ABXT51_06595)	-	1304422..1305177 (+)	756	WP_271541071.1	amino acid ABC transporter ATP-binding protein	-
ABXT51_RS06600 (ABXT51_06600)	ltaE	1305182..1306243 (-)	1062	WP_416694693.1	low-specificity L-threonine aldolase	-
ABXT51_RS06605 (ABXT51_06605)	-	1306257..1306913 (-)	657	WP_416694695.1	hypothetical protein	-
ABXT51_RS06610 (ABXT51_06610)	hemJ	1306961..1307386 (-)	426	WP_416651297.1	protoporphyrinogen oxidase HemJ	-
ABXT51_RS06615 (ABXT51_06615)	pilA	1307537..1308490 (+)	954	WP_416694697.1	signal recognition particle-docking protein FtsY	Machinery gene
ABXT51_RS06620 (ABXT51_06620)	-	1308500..1308790 (-)	291	WP_416686418.1	4a-hydroxytetrahydrobiopterin dehydratase	-
ABXT51_RS06625 (ABXT51_06625)	hemC	1308792..1309709 (-)	918	WP_416696308.1	hydroxymethylbilane synthase	-
ABXT51_RS06630 (ABXT51_06630)	argH	1309924..1311309 (+)	1386	WP_416694699.1	argininosuccinate lyase	-
ABXT51_RS06635 (ABXT51_06635)	fmt	1311309..1312238 (+)	930	WP_416694701.1	methionyl-tRNA formyltransferase	-
ABXT51_RS06640 (ABXT51_06640)	-	1312249..1312698 (-)	450	WP_416694703.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 34597.83 Da
• Isoelectric Point: 5.8184

>NTDB_id=1015929 ABXT51_RS06615 WP_416694697.1 1307537..1308490(+) (pilA) [Candidatus Pseudothioglobus sp. Uisw_050_01]
MLNFFKKNQSPESEGETKKPSLKDRLFKSKTKLGDGLSSLLMGKKKIDEALLEDLEMLLIGADIGIQTTDKVIESVRKKA
SRKELKDSDGLYELIKIELESFLIKENLLQTNVDKTFVILVVGINGAGKTTTIGKLAKLFQSEGKSIMLAAGDTFRAAAV
EQLQVWGERNDIPVIAQKTGADAASVVYDAYQSAIAKDIDILIADTAGRLHTQDNLMQELEKIKRVLKKHNEDAPHETLL
VIDGGSGQNAIQQANEFHKSINLSGLAVTKLDGTAKGGVLFAISDSLKLPIRFIGVGEAIDDLKPFNAKDFVDALFD

Nucleotide

• Length: 954 bp

>NTDB_id=1015929 ABXT51_RS06615 WP_416694697.1 1307537..1308490(+) (pilA) [Candidatus Pseudothioglobus sp. Uisw_050_01]
ATGCTAAACTTTTTTAAAAAAAATCAAAGCCCTGAGTCTGAAGGTGAGACAAAAAAACCTTCACTAAAAGATCGGCTATT
TAAATCCAAAACTAAACTTGGAGATGGTCTTTCATCCCTTCTTATGGGTAAAAAGAAAATAGATGAAGCACTTCTTGAAG
ATTTAGAAATGCTTTTAATTGGAGCAGATATAGGTATTCAAACAACTGACAAGGTTATTGAGTCTGTGAGAAAAAAAGCA
TCTAGAAAAGAACTTAAGGACAGTGATGGTCTTTATGAACTTATAAAAATTGAACTAGAATCATTCTTAATTAAAGAAAA
TTTACTACAAACAAATGTTGATAAAACTTTTGTTATTCTTGTTGTTGGGATTAATGGTGCTGGAAAAACTACCACGATTG
GTAAGCTTGCTAAGCTATTTCAAAGTGAGGGAAAATCTATAATGCTTGCAGCTGGAGACACTTTTCGTGCTGCTGCTGTT
GAGCAGCTTCAAGTTTGGGGAGAGAGGAATGATATTCCAGTCATCGCTCAAAAAACAGGAGCAGACGCAGCCTCGGTTGT
ATATGATGCTTACCAGTCAGCGATTGCTAAAGATATTGATATCTTAATTGCAGATACTGCAGGAAGACTTCATACACAAG
ATAATTTAATGCAAGAACTTGAAAAAATTAAGAGAGTACTTAAAAAGCATAATGAAGATGCTCCACATGAAACTCTCTTA
GTTATCGATGGTGGGTCAGGTCAAAATGCGATTCAACAAGCAAATGAATTTCATAAATCCATTAACCTATCAGGACTTGC
TGTCACTAAACTTGATGGAACAGCTAAAGGTGGAGTTTTATTTGCAATTTCAGACTCTCTTAAACTGCCTATTCGTTTTA
TTGGGGTGGGGGAAGCAATCGACGATTTAAAACCTTTTAATGCAAAAGATTTTGTTGATGCTTTATTTGATTAG

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (117-316)

• SRP54-type protein, helical bundle domain (SRP54_N) (33-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.316	95.899	0.492