Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DQL62_RS09755 Genome accession   NZ_LS483300
Coordinates   1902354..1903172 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain NCTC7485     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1897354..1908172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL62_RS09730 (NCTC7485_01850) - 1898447..1899424 (+) 978 WP_000379092.1 metal-dependent hydrolase -
  DQL62_RS09740 (NCTC7485_01851) - 1899685..1900521 (-) 837 WP_000886477.1 hypothetical protein -
  DQL62_RS09745 (NCTC7485_01852) - 1900530..1902047 (-) 1518 WP_111725125.1 ABC transporter ATP-binding protein -
  DQL62_RS09750 (NCTC7485_01853) - 1902062..1902376 (-) 315 WP_045158457.1 YfhH family protein -
  DQL62_RS09755 (NCTC7485_01854) recX 1902354..1903172 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  DQL62_RS09760 (NCTC7485_01855) sgtB 1903433..1904242 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  DQL62_RS09765 (NCTC7485_01856) - 1904582..1905097 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  DQL62_RS09770 (NCTC7485_01857) - 1905227..1905388 (-) 162 WP_001005407.1 SE1561 family protein -
  DQL62_RS09775 (NCTC7485_01858) yfkAB 1905611..1906762 (+) 1152 WP_001089616.1 radical SAM/CxCxxxxC motif protein YfkAB -
  DQL62_RS09780 (NCTC7485_01859) - 1907023..1907553 (-) 531 WP_000184387.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=1015693 DQL62_RS09755 WP_001124422.1 1902354..1903172(-) (recX) [Staphylococcus aureus strain NCTC7485]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=1015693 DQL62_RS09755 WP_001124422.1 1902354..1903172(-) (recX) [Staphylococcus aureus strain NCTC7485]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACTTTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGATATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGTAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996