Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DQL62_RS03435 Genome accession   NZ_LS483300
Coordinates   677159..677833 (+) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus strain NCTC7485     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 672159..682833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL62_RS03410 (NCTC7485_00642) - 672376..673443 (+) 1068 WP_000980143.1 hypothetical protein -
  DQL62_RS03415 (NCTC7485_00643) - 673594..674637 (+) 1044 WP_001030774.1 alpha/beta hydrolase -
  DQL62_RS03420 (NCTC7485_00644) - 674966..675394 (+) 429 WP_000198498.1 hypothetical protein -
  DQL62_RS03425 (NCTC7485_00645) - 675601..676107 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  DQL62_RS03430 (NCTC7485_00646) graX 676220..677143 (+) 924 WP_000802957.1 auxiliary protein GraX/ApsX -
  DQL62_RS03435 (NCTC7485_00647) braR 677159..677833 (+) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  DQL62_RS03440 (NCTC7485_00648) graS 677826..678866 (+) 1041 WP_001061258.1 histidine kinase GraS/ApsS -
  DQL62_RS03445 (NCTC7485_00649) vraF 679010..679771 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  DQL62_RS03450 (NCTC7485_00650) vraG 679761..681650 (+) 1890 WP_000143630.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=1015636 DQL62_RS03435 WP_001166496.1 677159..677833(+) (braR) [Staphylococcus aureus strain NCTC7485]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=1015636 DQL62_RS03435 WP_001166496.1 677159..677833(+) (braR) [Staphylococcus aureus strain NCTC7485]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATACTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397