Detailed information NTG0101547

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: APECO2_RS00905
• Genome accession: NZ_CP006834
• Coordinates: 181296..182279 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli APEC O2-211
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 176296..187279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APECO2_RS00885 (APECO2_22450)	dppA	177439..179046 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
APECO2_RS00895 (APECO2_22460)	dppB	179354..180373 (+)	1020	WP_000938853.1	dipeptide ABC transporter permease DppB	-
APECO2_RS00900 (APECO2_22465)	dppC	180383..181285 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
APECO2_RS00905 (APECO2_22470)	amiE	181296..182279 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
APECO2_RS00910 (APECO2_22475)	dppF	182276..183280 (+)	1005	WP_000107036.1	dipeptide ABC transporter ATP-binding subunit DppF	-
APECO2_RS00915 (APECO2_22480)	yhjV	183310..184581 (-)	1272	WP_001318103.1	aromatic amino acid transport family protein	-
APECO2_RS00925 (APECO2_24930)	-	185057..185164 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
APECO2_RS27835	-	185540..185647 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=101547 APECO2_RS00905 WP_001196486.1 181296..182279(+) (amiE) [Escherichia coli APEC O2-211]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=101547 APECO2_RS00905 WP_001196486.1 181296..182279(+) (amiE) [Escherichia coli APEC O2-211]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGGGAGTCTGGCTCCGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTTGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACT
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATTGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTTGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404