Detailed information NTG1015267

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JMX26_RS20870
• Genome accession: NZ_LR898868
• Coordinates: 4324480..4325505 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MSB1_1D isolate MSB1_1D
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4319480..4330505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JMX26_RS20850	metJ	4320541..4320858 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
JMX26_RS20855	yiiX	4321042..4321650 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
JMX26_RS20860	rpmE	4321711..4321923 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
JMX26_RS20865	priA	4322126..4324324 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
JMX26_RS20870	cytR	4324480..4325505 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JMX26_RS20875	ftsN	4325597..4326556 (+)	960	WP_000068828.1	cell division protein FtsN	-
JMX26_RS20880	hslV	4326649..4327179 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JMX26_RS20885	hslU	4327189..4328520 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
JMX26_RS20890	menA	4328587..4329513 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JMX26_RS20895	rraA	4329606..4330091 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JMX26_RS20900	zapB	4330176..4330421 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1015267 JMX26_RS20870 WP_000644904.1 4324480..4325505(+) (cytR) [Escherichia coli strain MSB1_1D isolate MSB1_1D]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1015267 JMX26_RS20870 WP_000644904.1 4324480..4325505(+) (cytR) [Escherichia coli strain MSB1_1D isolate MSB1_1D]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628