Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ABXJ05_RS06465 Genome accession   NZ_CP159637
Coordinates   1358909..1359535 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain Z81-2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1353909..1364535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXJ05_RS06445 (ABXJ05_06445) - 1354308..1356068 (-) 1761 WP_017384808.1 Lon protease family protein -
  ABXJ05_RS06450 (ABXJ05_06450) matP 1356255..1356707 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  ABXJ05_RS06455 (ABXJ05_06455) ompA 1356773..1357825 (-) 1053 WP_354017027.1 porin OmpA -
  ABXJ05_RS06460 (ABXJ05_06460) sulA 1358182..1358691 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  ABXJ05_RS06465 (ABXJ05_06465) sxy/tfoX 1358909..1359535 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  ABXJ05_RS06470 (ABXJ05_06470) yccS 1359492..1361654 (-) 2163 WP_015570895.1 YccS family putative transporter -
  ABXJ05_RS06475 (ABXJ05_06475) - 1361673..1362119 (-) 447 WP_003858149.1 YccF domain-containing protein -
  ABXJ05_RS06480 (ABXJ05_06480) helD 1362242..1364296 (+) 2055 WP_017384802.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=1015176 ABXJ05_RS06465 WP_017384804.1 1358909..1359535(+) (sxy/tfoX) [Enterobacter hormaechei strain Z81-2]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1015176 ABXJ05_RS06465 WP_017384804.1 1358909..1359535(+) (sxy/tfoX) [Enterobacter hormaechei strain Z81-2]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment