Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   ABXJ33_RS09615 Genome accession   NZ_CP159629
Coordinates   1978053..1979726 (-) Length   557 a.a.
NCBI ID   WP_002394342.1    Uniprot ID   A0A125WAC2
Organism   Enterococcus faecalis strain Z217-3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1973053..1984726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXJ33_RS09585 (ABXJ33_09585) ftsL 1974067..1974474 (-) 408 WP_002358883.1 cell division protein FtsL -
  ABXJ33_RS09590 (ABXJ33_09590) rsmH 1974491..1975447 (-) 957 WP_002355891.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  ABXJ33_RS09595 (ABXJ33_09595) mraZ 1975462..1975947 (-) 486 WP_025191097.1 division/cell wall cluster transcriptional repressor MraZ -
  ABXJ33_RS09600 (ABXJ33_09600) - 1976181..1976573 (-) 393 WP_002383401.1 DUF3397 domain-containing protein -
  ABXJ33_RS09605 (ABXJ33_09605) - 1976818..1977783 (+) 966 WP_002387038.1 magnesium transporter CorA family protein -
  ABXJ33_RS09610 (ABXJ33_09610) - 1977851..1977961 (+) 111 WP_002383399.1 DUF4044 domain-containing protein -
  ABXJ33_RS09615 (ABXJ33_09615) recN 1978053..1979726 (-) 1674 WP_002394342.1 DNA repair protein RecN Machinery gene
  ABXJ33_RS09620 (ABXJ33_09620) - 1979744..1980193 (-) 450 WP_002358881.1 ArgR family transcriptional regulator -
  ABXJ33_RS09625 (ABXJ33_09625) - 1980332..1981147 (-) 816 WP_002364633.1 TlyA family rRNA (cytidine-2'-O)-methyltransferase -
  ABXJ33_RS09630 (ABXJ33_09630) - 1981161..1982042 (-) 882 WP_002355879.1 polyprenyl synthetase family protein -
  ABXJ33_RS09635 (ABXJ33_09635) - 1982042..1982272 (-) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -
  ABXJ33_RS09640 (ABXJ33_09640) xseA 1982274..1983620 (-) 1347 WP_002355877.1 exodeoxyribonuclease VII large subunit -
  ABXJ33_RS09645 (ABXJ33_09645) - 1983630..1984475 (-) 846 WP_002355876.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62627.05 Da        Isoelectric Point: 4.5772

>NTDB_id=1015011 ABXJ33_RS09615 WP_002394342.1 1978053..1979726(-) (recN) [Enterococcus faecalis strain Z217-3]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKKLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDPEYKSLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=1015011 ABXJ33_RS09615 WP_002394342.1 1978053..1979726(-) (recN) [Enterococcus faecalis strain Z217-3]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGCGGCTCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGAAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGGATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCGTATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGT
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATCCAGAATATAAATC
ATTGTCAGATACTGTTCAAAATGCTTACTACTTACTACAAGAAGCTAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGACGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGTGATTCG
ATCGAAACGATTTTATCTTACTATGAAGAAATCACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCCGCTCATCAACAAGCGTTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTCGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACTGAATTTGAAGTCCGTTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGCTAGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTCAGTGGCCGTGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCAGCCGTTGCCGATGAACATTATTTTATTGA
AAAAGAAATCGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCGCGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCAATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A125WAC2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501

Multiple sequence alignment