Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ABXJ50_RS14050 Genome accession   NZ_CP159627
Coordinates   2920927..2921553 (-) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain Z226-3     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 2915927..2926553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXJ50_RS14035 (ABXJ50_14035) helD 2916166..2918220 (-) 2055 WP_188511950.1 DNA helicase IV -
  ABXJ50_RS14040 (ABXJ50_14040) - 2918343..2918789 (+) 447 WP_003858149.1 YccF domain-containing protein -
  ABXJ50_RS14045 (ABXJ50_14045) yccS 2918808..2920970 (+) 2163 WP_003858151.1 YccS family putative transporter -
  ABXJ50_RS14050 (ABXJ50_14050) sxy/tfoX 2920927..2921553 (-) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  ABXJ50_RS14055 (ABXJ50_14055) sulA 2921771..2922280 (+) 510 WP_003858155.1 SOS-induced cell division inhibitor SulA -
  ABXJ50_RS14060 (ABXJ50_14060) ompA 2922637..2923689 (+) 1053 WP_003858156.1 porin OmpA -
  ABXJ50_RS14065 (ABXJ50_14065) matP 2923755..2924207 (-) 453 WP_003858158.1 macrodomain Ter protein MatP -
  ABXJ50_RS14070 (ABXJ50_14070) - 2924394..2926154 (+) 1761 WP_003858160.1 Lon protease family protein -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=1014958 ABXJ50_RS14050 WP_023315767.1 2920927..2921553(-) (sxy/tfoX) [Enterobacter hormaechei strain Z226-3]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1014958 ABXJ50_RS14050 WP_023315767.1 2920927..2921553(-) (sxy/tfoX) [Enterobacter hormaechei strain Z226-3]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572


Multiple sequence alignment