Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABWX11_RS10145 | Genome accession | NZ_CP159626 |
| Coordinates | 2149085..2149465 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain NAB01B-R1 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2144085..2154465
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWX11_RS10115 (ABWX11_10115) | tadA | 2144203..2144706 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| ABWX11_RS10120 (ABWX11_10120) | - | 2144713..2145837 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABWX11_RS10125 (ABWX11_10125) | ung | 2145834..2146547 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ABWX11_RS10130 (ABWX11_10130) | - | 2146598..2147194 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ABWX11_RS10135 (ABWX11_10135) | gspK | 2147425..2148384 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ABWX11_RS10140 (ABWX11_10140) | xcpW | 2148384..2149085 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABWX11_RS10145 (ABWX11_10145) | xcpV | 2149085..2149465 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABWX11_RS10150 (ABWX11_10150) | - | 2149455..2150009 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABWX11_RS10155 (ABWX11_10155) | - | 2150019..2150627 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABWX11_RS10160 (ABWX11_10160) | - | 2150665..2151438 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ABWX11_RS10165 (ABWX11_10165) | - | 2151456..2151797 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABWX11_RS10170 (ABWX11_10170) | - | 2151809..2152789 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ABWX11_RS10175 (ABWX11_10175) | kdsB | 2152801..2153562 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1014919 ABWX11_RS10145 WP_000836911.1 2149085..2149465(-) (xcpV) [Acinetobacter baumannii strain NAB01B-R1]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1014919 ABWX11_RS10145 WP_000836911.1 2149085..2149465(-) (xcpV) [Acinetobacter baumannii strain NAB01B-R1]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |