Detailed information NTG0101487

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: APECO18_RS11140
• Genome accession: NZ_CP006830
• Coordinates: 2203263..2204468 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161829.1
• Uniprot ID: A0A0H2Z2G4
• Organism: Escherichia coli APEC O18
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2198263..2209468

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APECO18_RS11125 (APECO18_10850)	-	2198778..2200454 (+)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-
APECO18_RS11130 (APECO18_10855)	kdsB	2200464..2201204 (+)	741	WP_000030755.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
APECO18_RS11135 (APECO18_10860)	-	2201201..2203228 (+)	2028	WP_047340646.1	capsular polysaccharide biosynthesis protein	-
APECO18_RS11140 (APECO18_10865)	kpsS	2203263..2204468 (+)	1206	WP_001161829.1	capsular biosynthesis protein	Regulator
APECO18_RS11145 (APECO18_10870)	-	2204618..2205847 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
APECO18_RS11150 (APECO18_10875)	-	2205837..2206985 (-)	1149	WP_000197085.1	DUF6716 putative glycosyltransferase	-
APECO18_RS11155 (APECO18_10880)	neuC	2206978..2208153 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
APECO18_RS11160 (APECO18_10885)	-	2208150..2209407 (-)	1258	Protein_2151	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47976.30 Da
• Isoelectric Point: 10.0024

>NTDB_id=101487 APECO18_RS11140 WP_001161829.1 2203263..2204468(+) (kpsS) [Escherichia coli APEC O18]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEDGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLSERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=101487 APECO18_RS11140 WP_001161829.1 2203263..2204468(+) (kpsS) [Escherichia coli APEC O18]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GTCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGACGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTAAGTAAGG
AATATGGCTTAAGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: A0A0H2Z2G4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	40.103	97.007	0.389